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SCNpilot_expt_500_bf_scaffold_4344

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4344_1
unknown

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comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4344_2
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(80..1069)
DNA (990bp) protein (330aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q533_9RHIZ rbh
Binding-protein-dependent transport systems inner membrane component rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDI12369.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_expt_500_bf_scaffold_4344_3
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1074..3182)
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00036C082C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABR64304.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_500_bf_scaffold_4344_4
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3460..4572)
DNA (1113bp) protein (371aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UKX3_SINMW rbh
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABR64303.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_500_bf_scaffold_4344_5
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4569..5333)
DNA (765bp) protein (255aa)
ABC transporter substrate-binding protein n=1 Tax=Sinorhizobium medicae RepID=UPI00036F4DEB
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABR64303.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_500_bf_scaffold_4344_6
RLO_PLX_64_10, Bacteria

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5673..6764
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B69D4E rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_500_bf_scaffold_4344_7
RLO_PLX_64_10, Bacteria

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7165..8253
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B69D4E
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_expt_500_bf_scaffold_4344_8
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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8519..10339
DNA (1821bp) protein (607aa)
Extracellular solute-binding protein family 5 n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E3A1_DICTD rbh
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACK42975.1}; Flags: Precursor;; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
SCNpilot_expt_500_bf_scaffold_4344_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10399..11004
DNA (606bp) protein (202aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CF67_DESTA
ABC transporter permease {ECO:0000313|EMBL:KGM35244.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
SCNpilot_expt_500_bf_scaffold_4344_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11054..11329
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037B341F
ABC transporter permease {ECO:0000313|EMBL:KKB12400.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative permease component of ABC transporter; K02033 peptide/nickel transport system permease protein
SCNpilot_expt_500_bf_scaffold_4344_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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11326..12462
DNA (1137bp) protein (379aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLY4_ROSCS
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABU58532.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_expt_500_bf_scaffold_4344_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12459..13496
DNA (1038bp) protein (346aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Paenibacillus barengoltzii G22 RepID=R9LG76_9BACL rbh
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KKB09883.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_500_bf_scaffold_4344_13
Thermobaculum terrenum, Thermobaculum, Bacteria

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13493..14446
DNA (954bp) protein (318aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD42_THET1 rbh
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACZ42707.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Displaying 13 items

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