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SCNpilot_expt_500_bf_scaffold_4914

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4914_1
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..268)
DNA (267bp) protein (89aa)
Putative oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNF2_RHITR
Oxidoreductase {ECO:0000313|EMBL:KKB76107.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative oxidoreductase
SCNpilot_expt_500_bf_scaffold_4914_2
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(272..739)
DNA (468bp) protein (156aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA764
Uncharacterized protein {ECO:0000313|EMBL:KKC33311.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_expt_500_bf_scaffold_4914_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(876..1769)
DNA (894bp) protein (298aa)
Probable sugar ABC transporter, permease protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2KE26_RHIEC rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB76282.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
sugar ABC transporter, permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_4914_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1806..2753)
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B3EA74 rbh
ABC transporter permease {ECO:0000313|EMBL:KKC33008.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_4914_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2758..3969)
DNA (1212bp) protein (404aa)
YesO protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFQ1_RHIFH
Cell processes transport of small molecules {ECO:0000313|EMBL:CDP51488.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
yesO; sn-glycerol-3-phosphate-binding periplasmic protein ugpB; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_4914_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4182..4862)
DNA (681bp) protein (227aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPW4_9RHIZ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDP51486.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_4914_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5048..5776
DNA (729bp) protein (243aa)
oxidoreductase (EC:1.1.1.-)
oxidoreductase n=1 Tax=Rhizobium mongolense RepID=UPI0003B68DC8
Oxidoreductase {ECO:0000313|EMBL:KKB12341.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
Displaying 7 items

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