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SCNpilot_expt_500_bf_scaffold_13104

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_13104_1
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..604)
DNA (603bp) protein (201aa)
Bacterial regulatory protein, LacI family protein 4 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLI7_ACHXA
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP50747.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
SCNpilot_expt_500_bf_scaffold_13104_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(634..1920)
DNA (1287bp) protein (429aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
phosphopyruvate hydratase protein; K01689 enolase [EC:4.2.1.11]
phosphopyruvate hydratase n=1 Tax=Rhizobium gallicum RepID=UPI00037EC02B
SCNpilot_expt_500_bf_scaffold_13104_3
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1927..2898)
DNA (972bp) protein (324aa)
Phosphotransferase enzyme family protein n=2 Tax=Streptomyces turgidiscabies Car8 RepID=L7F9U9_9ACTO
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:ELP67826.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
aminoglycoside phosphotransferase (antibiotic resistance protein)
SCNpilot_expt_500_bf_scaffold_13104_4
Hyphomonas adhaerens, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3007..3306
DNA (300bp) protein (100aa)
Short-chain alcohol dehydrogenase like protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ08_9BURK
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:KCZ82799.1}; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
short chain dehydrogenase/reductase family oxidoreductase
SCNpilot_expt_500_bf_scaffold_13104_5
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3294..3707
DNA (414bp) protein (138aa)
3-hydroxybutyrate dehydrogenase type 2 {ECO:0000313|EMBL:CCM77401.1}; EC=1.1.1.30 {ECO:0000313|EMBL:CCM77401.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
3-hydroxybutyrate dehydrogenase type 2 n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PLR0_9RHIZ
2-(s)-hydroxypropyl-com dehydrogenase
SCNpilot_expt_500_bf_scaffold_13104_6
unknown

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comp(3714..4022)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_13104_7
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4025..4768)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH62_9BRAD
conserved exported hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM92926.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_expt_500_bf_scaffold_13104_8
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4910..5920)
DNA (1011bp) protein (337aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000363D938 rbh
Displaying 8 items

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