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SCNpilot_expt_500_bf_scaffold_2836

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2836_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(211..963)
DNA (753bp) protein (251aa)
Putative membrane protein YfcA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD9_PELHB rbh
Membrane protein {ECO:0000313|EMBL:KFL27700.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative membrane protein YfcA; K07090 rbh
SCNpilot_expt_500_bf_scaffold_2836_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(960..1694)
DNA (735bp) protein (245aa)
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00046302}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase catalytic subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD7_PELHB
SCNpilot_expt_500_bf_scaffold_2836_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1691..2776)
DNA (1086bp) protein (362aa)
ATP phosphoribosyltransferase regulatory subunit {ECO:0000313|EMBL:CDP52782.1}; EC=2.4.2.17 {ECO:0000313|EMBL:CDP52782.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Putative ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD6_PELHB
putative ATP phosphoribosyltransferase regulatory subunit; K02502 ATP phosphoribosyltransferase regulatory subunit
SCNpilot_expt_500_bf_scaffold_2836_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2773..4233)
DNA (1461bp) protein (487aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RU34_RHIET
SCNpilot_expt_500_bf_scaffold_2836_5
unknown

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5329..5469
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2836_6
unknown

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5466..5630
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2836_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5690..6292)
DNA (603bp) protein (201aa)
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:CDP52778.1}; EC=3.2.2.20 {ECO:0000313|EMBL:CDP52778.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
DNA-3-methyladenine glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
DNA-3-methyladenine glycosylase I n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D0B0_9RHIZ
SCNpilot_expt_500_bf_scaffold_2836_8
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6437..6871
DNA (435bp) protein (145aa)
CheY chemotaxis protein n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DW07_SULAA
Uncharacterized protein {ECO:0000313|EMBL:KKB86021.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
chemotaxis protein CheY; K03413 two-component system, chemotaxis family, response regulator CheY
SCNpilot_expt_500_bf_scaffold_2836_9
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6934..7413
DNA (480bp) protein (160aa)
Probable glutathione S-transferase-related transme mbrane protein {ECO:0000313|EMBL:CDP50219.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDP50219.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J3A7J4_9CAUL
Activator of Hsp90 ATPase 1 family protein
SCNpilot_expt_500_bf_scaffold_2836_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8329..10143
DNA (1815bp) protein (605aa)
Flp pilus assembly protein TadG n=1 Tax=Caulobacter sp. AP07 RepID=J3AI50_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB13800.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2836_11
unknown

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comp(10145..10369)
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_2836_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10652..11188)
DNA (537bp) protein (179aa)
ATP-binding protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXD3_9ACTO
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:AGZ41618.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 12 items

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