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SCNpilot_expt_500_bf_scaffold_2880

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2880_1
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..863
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036AA3F7
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACA15664.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_expt_500_bf_scaffold_2880_2
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(918..2489)
DNA (1572bp) protein (524aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14]
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003684597 rbh
Hydantoin utilization protein B {ECO:0000313|EMBL:GAK71977.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
SCNpilot_expt_500_bf_scaffold_2880_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2542..4611)
DNA (2070bp) protein (690aa)
N-methylhydantoinase A (HuyA-1) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036BE0CA rbh
5-oxoprolinase {ECO:0000313|EMBL:KKB07085.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_expt_500_bf_scaffold_2880_4
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4678..5646)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036C1FD5 rbh
Ribose ABC transporter permease protein {ECO:0000313|EMBL:GAK71975.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
inner-membrane translocator; K10440 ribose transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_2880_5
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5646..7181)
DNA (1536bp) protein (512aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003651798 rbh
Ribose ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAK71974.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
SCNpilot_expt_500_bf_scaffold_2880_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7312..8304)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000367CB75 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07078.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_2880_7
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8395..8940)
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5L7_KETVY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM42698.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
SCNpilot_expt_500_bf_scaffold_2880_8
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8937..10169)
DNA (1233bp) protein (411aa)
Amidohydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBK1_PELHB
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AEQ53642.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_expt_500_bf_scaffold_2880_9
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10344..10631)
DNA (288bp) protein (96aa)
acetylornithine deacetylase (EC:3.5.1.16); K01438 acetylornithine deacetylase [EC:3.5.1.16]
Putative peptidase M20 family protein Acetylornithine deacetylase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TNC5_9BRAD
Peptidase M20 family protein {ECO:0000313|EMBL:GAK71971.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
Displaying 9 items

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