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SCNpilot_expt_500_bf_scaffold_6785

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6785_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..619
DNA (618bp) protein (206aa)
Secretion protein HlyD family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVG1_ALIDB
secretion protein hlyd family protein; K03543 multidrug resistance protein A
Secretion protein HlyD family protein {ECO:0000313|EMBL:ADU98171.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_6785_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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622..2190
DNA (1569bp) protein (523aa)
Drug resistance transporter, EmrB/QacA subfamily n=2 Tax=Alicycliphilus denitrificans RepID=E8TVG0_ALIDB rbh
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEB82766.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_6785_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2254..2943)
DNA (690bp) protein (230aa)
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
Carboxymethylenebutenolidase {ECO:0000313|EMBL:AEB82765.1}; EC=3.1.1.45 {ECO:0000313|EMBL:AEB82765.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Carboxymethylenebutenolidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVF9_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_6785_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2995..3741
DNA (747bp) protein (249aa)
glucose-1-dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000370FEE8 rbh
Dehydrogenase {ECO:0000313|EMBL:GAD21142.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
short-chain dehydrogenase/reductase sdr rbh
SCNpilot_expt_500_bf_scaffold_6785_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3741..4340
DNA (600bp) protein (200aa)
Multiple antibiotic resistance (MarC)-related protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVF8_ALIDB
multiple antibiotic resistance (marc)-related protein; K05595 multiple antibiotic resistance protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_6785_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4291..4695)
DNA (405bp) protein (135aa)
Regulator of ribonuclease activity A n=2 Tax=Alicycliphilus denitrificans RepID=E8TVF7_ALIDB
regulator of ribonuclease activity A; K02553 regulator of ribonuclease activity A
Ribonuclease activity A regulator {ECO:0000313|EMBL:GAO26072.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_6785_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4774..5763)
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUU0_ALIDB rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO26071.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_6785_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5798..7747)
DNA (1950bp) protein (650aa)
aconitate hydratase domain-containing protein; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
Aconitate hydratase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUT9_ALIDB rbh
Aconitate hydratase domain-containing protein {ECO:0000313|EMBL:AEB82761.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_6785_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7827..8810)
DNA (984bp) protein (328aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFA9_ALIDK rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB82760.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_6785_10
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8958..9347
DNA (390bp) protein (130aa)
camphor resistance protein CrcB n=1 Tax=Xanthomonas oryzae RepID=UPI0003071276
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
camphor resistance protein CrcB; K06199 CrcB protein
SCNpilot_expt_500_bf_scaffold_6785_11
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9359..9688
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Xanthomonas oryzae RepID=UPI0003042C6F
Uncharacterized protein {ECO:0000313|EMBL:AJC44731.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6785_12
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9888..11075)
DNA (1188bp) protein (396aa)
acyl-CoA transferase/carnitine dehydratase (EC:5.1.99.-); K01797 [EC:5.1.99.-] rbh
Acyl-CoA transferase/carnitine dehydratase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XKJ6_9RALS rbh
Acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EON19829.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
SCNpilot_expt_500_bf_scaffold_6785_13
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11169..11264
DNA (96bp) protein (32aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EYS87843.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
Displaying 13 items

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