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SCNpilot_expt_500_bf_scaffold_8018

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8018_1
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1016)
DNA (1014bp) protein (338aa)
ABC transporter related protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JTG5_DESFR
ABC transporter related protein {ECO:0000313|EMBL:EFL52425.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
putative ABC transporter; fused ATPase and inner membrane components
SCNpilot_expt_500_bf_scaffold_8018_2
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1016..1798)
DNA (783bp) protein (261aa)
phosphonate-transporting ATPase (EC:3.6.3.28); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
Putative ABC transport ATP-binding subunit n=1 Tax=Janthinobacterium lividum RepID=A0SZ65_9BURK
Putative ABC transport ATP-binding subunit {ECO:0000313|EMBL:ABK64107.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
SCNpilot_expt_500_bf_scaffold_8018_3
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1795..2844)
DNA (1050bp) protein (350aa)
Iron-chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KAX9_PSEF5 rbh
FeCT family iron-chelate ABC transporterpermease; K02015 iron complex transport system permease protein rbh
Iron-chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:AAY92768.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
SCNpilot_expt_500_bf_scaffold_8018_4
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2841..4904)
DNA (2064bp) protein (688aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUS7_DELSC rbh
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEF88015.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_500_bf_scaffold_8018_5
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4932..5339)
DNA (408bp) protein (136aa)
TonB-dependent siderophore receptor n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUS6_DELSC
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AEF88014.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_expt_500_bf_scaffold_8018_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7152..8000)
DNA (849bp) protein (283aa)
Transcriptional regulator, AraC family n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AUS5_DELSC rbh
Helix-turn-helix domain protein {ECO:0000313|EMBL:KFJ14270.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
AraC family transcriptional regulator; K12243 AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors rbh
Displaying 6 items

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