ggKbase home page

SCNpilot_expt_500_bf_scaffold_8231

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8231_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..130)
DNA (129bp) protein (43aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT65_ALIDB
carbohydrate kinase, yjef related protein
Carbohydrate kinase {ECO:0000313|EMBL:GAO27350.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_8231_2
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(449..1486)
DNA (1038bp) protein (346aa)
Probable family 20 transposase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YFD4_9BURK rbh
transposase IS116/IS110/IS902 family protein rbh
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_500_bf_scaffold_8231_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1837..3078)
DNA (1242bp) protein (414aa)
D-amino-acid dehydrogenase (EC:1.4.99.1); K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
D-amino-acid dehydrogenase {ECO:0000313|EMBL:AEB85802.1}; EC=1.4.99.1 {ECO:0000313|EMBL:AEB85802.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
D-amino-acid dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBF7_ALIDK rbh
SCNpilot_expt_500_bf_scaffold_8231_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3132..3920)
DNA (789bp) protein (263aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TT67_ALIDB
Amidase {ECO:0000313|EMBL:ADU99223.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_8231_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4642..5394
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXB5_9BURK rbh
rpsB; 30S ribosomal protein S2 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_500_bf_scaffold_8231_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5501..5740
DNA (240bp) protein (80aa)
Elongation factor Ts n=1 Tax=Acidovorax sp. KKS102 RepID=K0HRH3_9BURK
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 6 items

View Taxonomy