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SCNpilot_expt_500_bf_scaffold_8697

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8697_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..728)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR85_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU97796.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_8697_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(725..1975)
DNA (1251bp) protein (417aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4) rbh
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:AEB82455.1}; EC=6.4.1.4 {ECO:0000313|EMBL:AEB82455.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBW1_ALIDK rbh
SCNpilot_expt_500_bf_scaffold_8697_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1999..2670)
DNA (672bp) protein (224aa)
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBW1_ALIDK
carbamoyl-phosphate synthase l chain ATP-binding protein
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:GAO25730.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_8697_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2683..3846)
DNA (1164bp) protein (388aa)
acyl-CoA dehydrogenase; K11731 citronellyl-CoA dehydrogenase [EC:1.3.99.-] rbh
Acyl-CoA dehydrogenase domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR87_ALIDB rbh
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ADU97798.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_8697_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3980..5590)
DNA (1611bp) protein (537aa)
methylcrotonoyl-CoA carboxylase (EC:6.4.1.4); K13778 geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] rbh
Methylcrotonoyl-CoA carboxylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR88_ALIDB rbh
Methylcrotonoyl-CoA carboxylase {ECO:0000313|EMBL:GAO25732.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_8697_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5702..5866)
DNA (165bp) protein (55aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR89_ALIDB
Acylphosphatase {ECO:0000313|EMBL:AEB82458.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_8697_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5985..6269
DNA (285bp) protein (95aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR90_ALIDB
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:ADU97801.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_8697_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6575..7930
DNA (1356bp) protein (452aa)
homoserine dehydrogenase; K00003 homoserine dehydrogenase [EC:1.1.1.3] rbh
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Homoserine dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR91_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_8697_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8131..8370
DNA (240bp) protein (80aa)
gabD; succinate-semialdehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Putative succinate-semialdehyde dehydrogenase [NADP+] {ECO:0000313|EMBL:CCN24172.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CCN24172.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
Putative succinate-semialdehyde dehydrogenase [NADP+] n=3 Tax=Bordetella bronchiseptica RepID=K4QSA2_BORBO
Displaying 9 items

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