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SCNpilot_expt_500_bf_scaffold_8711

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8711_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..137)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZD3_ALIDB
hypothetical protein; K09954 hypothetical protein
Cytoplasmic protein {ECO:0000313|EMBL:GAO21296.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_8711_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(190..567)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZD4_ALIDB
copper resistance D domain-containing protein
Copper resistance D domain protein {ECO:0000313|EMBL:AEB83618.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_8711_3
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(623..1624)
DNA (1002bp) protein (334aa)
Aldo/keto reductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZD5_ALIDB rbh
aldo/keto reductase rbh
Oxidoreductase {ECO:0000313|EMBL:GAO24542.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_8711_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1830..3047)
DNA (1218bp) protein (406aa)
GntR family transcriptional regulator (EC:2.6.1.57) rbh
Aminotransferase class I and II n=2 Tax=Alicycliphilus denitrificans RepID=E8TZD7_ALIDB rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:GAO21292.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_8711_5
unknown

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3344..3682
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8711_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4055..4837)
DNA (783bp) protein (261aa)
amidase; K01426 amidase [EC:3.5.1.4] rbh
Amidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZE0_ALIDB rbh
Amidase {ECO:0000313|EMBL:ADV00961.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_8711_7
unknown

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4889..5002
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8711_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5556..6518
DNA (963bp) protein (321aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC37_ALIDK rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB83611.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_8711_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6515..7153
DNA (639bp) protein (213aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] rbh
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Endonuclease III n=2 Tax=Alicycliphilus denitrificans RepID=E8TZE2_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_8711_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7171..7674)
DNA (504bp) protein (168aa)
Appr-1-p processing domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZE3_ALIDB rbh
Appr-1-p processing domain-containing protein rbh
Appr-1-p processing domain protein {ECO:0000313|EMBL:AEB83609.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_8711_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7764..8606)
DNA (843bp) protein (281aa)
nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] rbh
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 147
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZE4_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_8711_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8852..10336)
DNA (1485bp) protein (495aa)
cobyric acid synthase cobq; K02232 adenosylcobyric acid synthase [EC:6.3.5.10] rbh
Cobyric acid synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZE5_ALIDB rbh
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying 12 items

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