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SCNpilot_expt_500_bf_scaffold_3268

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3268_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..835)
DNA (834bp) protein (278aa)
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZW1_ALIDB rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB84664.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_3268_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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898..1899
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=F4GB87_ALIDK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEB84663.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_3268_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1908..3185
DNA (1278bp) protein (426aa)
Amidase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB86_ALIDK rbh
amidase rbh
Amidase {ECO:0000313|EMBL:AEB84662.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_3268_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3189..4433)
DNA (1245bp) protein (415aa)
2-oxo-acid dehydrogenase E1 subunit (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Pyruvate dehydrogenase E1 component n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GB85_ALIDK
SCNpilot_expt_500_bf_scaffold_3268_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4542..5816)
DNA (1275bp) protein (425aa)
2-oxo-acid dehydrogenase E1; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ73_ALIDB
SCNpilot_expt_500_bf_scaffold_3268_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5905..6399
DNA (495bp) protein (165aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J1EJS7_9BURK
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJA09453.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
asnC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3268_7
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6531..8243
DNA (1713bp) protein (571aa)
Methyl-accepting chemotaxis protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XIA2_DELAC rbh
methyl-accepting chemotaxis domain-containing protein; K03406 methyl-accepting chemotaxis protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_expt_500_bf_scaffold_3268_8
unknown

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comp(8256..8321)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 8 items

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