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SCNpilot_expt_500_bf_scaffold_15360

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_15360_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..611
DNA (609bp) protein (203aa)
TonB family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TR47_ALIDB
tonb family protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:GAO24950.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_15360_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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611..1459
DNA (849bp) protein (283aa)
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Shikimate dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR48_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_15360_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1474..2196
DNA (723bp) protein (241aa)
monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-] rbh
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GF35_ALIDK rbh
Displaying 3 items

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