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SCNpilot_expt_500_bf_scaffold_17603

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_17603_1
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..410
DNA (408bp) protein (136aa)
Rne/Rng family ribonuclease; K08300 ribonuclease E [EC:3.1.26.12]
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Ribonuclease E n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCX2_ALIDK
SCNpilot_expt_500_bf_scaffold_17603_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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667..1440
DNA (774bp) protein (258aa)
UPF0246 protein Alide_3197 n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ98_ALIDB rbh
hypothetical protein; K09861 hypothetical protein rbh
UPF0246 protein Alide2_1250 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_17603_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1437..2045
DNA (609bp) protein (203aa)
procollagen-proline dioxygenase (EC:1.14.11.2); K00472 prolyl 4-hydroxylase [EC:1.14.11.2]
Procollagen-proline dioxygenase {ECO:0000313|EMBL:AEB83653.1}; EC=1.14.11.2 {ECO:0000313|EMBL:AEB83653.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Procollagen-proline dioxygenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ99_ALIDB
SCNpilot_expt_500_bf_scaffold_17603_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2021..2239
DNA (219bp) protein (73aa)
Procollagen-proline dioxygenase (EC:1.14.11.2); K00472 prolyl 4-hydroxylase [EC:1.14.11.2]
Procollagen-proline dioxygenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZ99_ALIDB
Procollagen-proline dioxygenase {ECO:0000313|EMBL:GAO24502.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_17603_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2298..3143
DNA (846bp) protein (282aa)
7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] rbh
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
NADPH-dependent 7-cyano-7-deazaguanine reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA0_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_17603_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3173..3364)
DNA (192bp) protein (64aa)
PAS sensor protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA1_ALIDB
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; K03776 aerotaxis receptor
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:GAO24504.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_17603_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3364..4704)
DNA (1341bp) protein (447aa)
PAS sensor protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA1_ALIDB rbh
Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer; K03776 aerotaxis receptor rbh
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:AEB83651.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_17603_8
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5150..5527
DNA (378bp) protein (126aa)
id=12549863 bin=BDI tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EWS58187.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
Displaying 8 items

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