ggKbase home page

SCNpilot_expt_500_bf_scaffold_7558

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7558_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..127
DNA (126bp) protein (42aa)
UPI0003D3D540 related cluster n=1 Tax=unknown RepID=UPI0003D3D540
Metal-dependent hydrolase {ECO:0000313|EMBL:GAD21710.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
endonuclease/exonuclease/phosphatase; K06896
SCNpilot_expt_500_bf_scaffold_7558_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124..1335
DNA (1212bp) protein (404aa)
cardiolipin synthase 2; K06132 putative cardiolipin synthase [EC:2.7.8.-] rbh
Cardiolipin synthase B {ECO:0000256|HAMAP-Rule:MF_01917}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_01917};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_01917};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Phospholipase D/Transphosphatidylase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MFU0_ACIET rbh
SCNpilot_expt_500_bf_scaffold_7558_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1335..2348
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003648A67 rbh
Predicted integral membrane protein {ECO:0000313|EMBL:GAD21712.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K07027 rbh
SCNpilot_expt_500_bf_scaffold_7558_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2311..3366
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003692EE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD21713.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
heat shock protein DnaJ domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_7558_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3411..3626
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JTX9_PSEST
Uncharacterized protein {ECO:0000313|EMBL:EPL63179.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
SCNpilot_expt_500_bf_scaffold_7558_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3623..3919
DNA (297bp) protein (99aa)
Plasmid stabilization system protein n=1 Tax=Pseudomonas stutzeri B1SMN1 RepID=S6JRA9_PSEST
Plasmid stabilization system protein {ECO:0000313|EMBL:EPL63178.1}; TaxID=1212549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri B1SMN1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7558_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3983..5743
DNA (1761bp) protein (587aa)
FAD dependent oxidoreductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRX7_ALIDB rbh
FAD-dependent oxidoreductase; K07137 rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAO25011.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_7558_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5658..5972)
DNA (315bp) protein (105aa)
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY5_ALIDB
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADV01462.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_7558_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5921..6235)
DNA (315bp) protein (105aa)
Regulatory protein MarR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY5_ALIDB
regulatory protein marr
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEB86420.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7558_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6366..7133
DNA (768bp) protein (256aa)
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (EC:1.1.1.100); K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] rbh
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY6_ALIDB rbh
Short chain CoA dehydrogenase {ECO:0000313|EMBL:GAO25020.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_expt_500_bf_scaffold_7558_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7580..7957
DNA (378bp) protein (126aa)
2-ketocyclohexanecarboxyl-CoA hydrolase (EC:4.1.3.36); K07536 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
2-ketocyclohexanecarboxyl-CoA hydrolase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY7_ALIDB
SCNpilot_expt_500_bf_scaffold_7558_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7977..8909
DNA (933bp) protein (311aa)
cyclohexanecarboxyl-CoA dehydrogenase; K04117 cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-]
Cyclohexanecarboxyl-CoA dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRY8_ALIDB
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAO25022.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Displaying 12 items

View Taxonomy