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SCNpilot_expt_500_bf_scaffold_7698

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7698_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1094
DNA (1092bp) protein (364aa)
Excinuclease ABC, A subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5A0_ALIDK
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7698_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1541..1924)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G598_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86444.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_expt_500_bf_scaffold_7698_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2109..2648
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WC80_ACISJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM43855.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_expt_500_bf_scaffold_7698_4
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2768..3817
DNA (1050bp) protein (350aa)
dihydroorotase, homodimeric type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] rbh
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Dihydroorotase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS13_ALIDB rbh
SCNpilot_expt_500_bf_scaffold_7698_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3841..4590
DNA (750bp) protein (250aa)
Putative transmembrane protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TS12_ALIDB rbh
transmembrane protein rbh
Putative transmembrane protein {ECO:0000313|EMBL:ADV01489.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_7698_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4717..5268
DNA (552bp) protein (184aa)
peptidase M48 Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
Protease HtpX homolog n=2 Tax=Alicycliphilus denitrificans RepID=E8TS11_ALIDB
SCNpilot_expt_500_bf_scaffold_7698_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5265..5552
DNA (288bp) protein (96aa)
heat shock protein htpx; K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog {ECO:0000255|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000255|HAMAP-Rule:MF_00188};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Protease HtpX homolog n=1 Tax=Acidovorax sp. (strain JS42) RepID=HTPX_ACISJ
SCNpilot_expt_500_bf_scaffold_7698_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5615..6139)
DNA (525bp) protein (175aa)
Porin n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH0_COMTE
Porin {ECO:0000313|EMBL:EED65873.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
porin
SCNpilot_expt_500_bf_scaffold_7698_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6877..7773
DNA (897bp) protein (299aa)
Alpha/beta hydrolase fold protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH1_COMTE rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EED65874.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 2-like rbh
SCNpilot_expt_500_bf_scaffold_7698_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..8744
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7WWH2_COMTE
UPF0065 protein in tcbD-tcbE intergenic region-like
Uncharacterized protein {ECO:0000313|EMBL:EED65875.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_expt_500_bf_scaffold_7698_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8770..10287
DNA (1518bp) protein (506aa)
Carotenoid oxygenase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WWH3_COMTE rbh
Carotenoid oxygenase {ECO:0000313|EMBL:EED65876.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
carotenoid oxygenase rbh
SCNpilot_expt_500_bf_scaffold_7698_12
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10284..10988
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Comamonas testosteroni RepID=UPI0002DCADD5 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EED65877.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_7698_13
unknown

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comp(11329..11409)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 13 items

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