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SCNpilot_expt_500_bf_scaffold_3029_1

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..865)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TZA3_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 288.0
  • Bit_score: 547
  • Evalue 1.00e-152
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 288.0
  • Bit_score: 547
  • Evalue 3.30e-153
  • rbh
LysR substrate-binding protein {ECO:0000313|EMBL:ADV00924.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 288.0
  • Bit_score: 547
  • Evalue 1.50e-152

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGAACTGAGACAGCTGCGCTACTTCGTGGCCGTGGCCGAGGAACTGCACTTCGGCAAGGCCGCGCAGCGGCTGGCCATCTCGCAGCCGCCGCTGAGCTTCAACATCGCCCGGCTGGAGGAATCGCTGGGCTACGCCTTGCTGCGGCGCAGCACCCGCGCGGTGGAGCTGACGGCGGCCGGCAAGGTCTTCTACCGCGAGGCCTGCCGCATCCTCAGCCTTGCCGACCAGGCCCAGGCACTGGGCGGCCGCGCCGCGCGGGGCGAGGCGGGCAGCCTGCGCATCGGATTCGTGGGGGCGGCGCTGCTCACGCCCATGGCCTCGGTGCTGCGGCGGTTCGATCTGGAGCGTCCGGGCCTGCTCATGACGGTGCACGAGCTCAACAGCTTCGAGCAGATCGACGCATTGCAGCGCGAGCAGATTGATTTCGGCATCCTGCACCCGCGCTCCATTCCGGAGGGCCTGCATGCCCAGGTGCTGTACCGCGAGCCCTTCGTCTGCGCCCTGCCGGCCTCCCATCCGCTGGCGGGCCGCAAGGAGATCCGCCTGCAGGCATTGAAGGACGAGCCTTTCGTGCTCTTCCCCCGCCATTTCTCGCCCGAGTACCACGACCGCATCATCGCCATGTGCGTGGCGGCGGGGTTCACGCCGCAGGTGCGCTACGAAGTGCGCGCCAATGCCACGGTGGCGTCGCTGGTGGCGGCGGGTTTTGGCGTCGCCATCGTTCCCCGCTCCGTTTGCCGCGTGGCGATCGATGGCCTGCAGTTCCGCCCCCTGGCCAGCACCCGCGTCGAATCGGAGCTCATCGGGGTCTGGCGCGGCGAGGATTACGAGAGCCTGATCCGCCCATTGCTGGCGGAAATG
PROTEIN sequence
Length: 288
MELRQLRYFVAVAEELHFGKAAQRLAISQPPLSFNIARLEESLGYALLRRSTRAVELTAAGKVFYREACRILSLADQAQALGGRAARGEAGSLRIGFVGAALLTPMASVLRRFDLERPGLLMTVHELNSFEQIDALQREQIDFGILHPRSIPEGLHAQVLYREPFVCALPASHPLAGRKEIRLQALKDEPFVLFPRHFSPEYHDRIIAMCVAAGFTPQVRYEVRANATVASLVAAGFGVAIVPRSVCRVAIDGLQFRPLASTRVESELIGVWRGEDYESLIRPLLAEM