ggKbase home page

SCNpilot_expt_500_bf_scaffold_6231

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6231_1
unknown

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6231_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


599..910
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=RL21_SORC5
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
SCNpilot_expt_500_bf_scaffold_6231_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


926..1186
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=2 Tax=Sorangium cellulosum RepID=RL27_SORC5
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_6231_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1219..2160
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YE86_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41133.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_6231_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2193..2486
DNA (294bp) protein (98aa)
Ferrous iron transport protein A n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHV9_SORC5
feoA; ferrous iron transport protein A; K04758 ferrous iron transport protein A
Ferrous iron transport protein A {ECO:0000313|EMBL:CAN98254.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_6231_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2483..4393
DNA (1911bp) protein (637aa)
Ferrous iron transport protein B n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHW2_SORC5 rbh
feoB; ferrous iron transport protein B; K04759 ferrous iron transport protein B rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:CAN98255.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_6231_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4434..5012
DNA (579bp) protein (193aa)
sensor histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Sensor histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTW6_SORC5
SCNpilot_expt_500_bf_scaffold_6231_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5039..5833
DNA (795bp) protein (265aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y893_SORCE
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6231_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5915..6709)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBI2_SORCE
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:EYF04041.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6231_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6779..7318)
DNA (540bp) protein (180aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FTY4_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN98577.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 10 items

View Taxonomy