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SCNpilot_expt_500_bf_scaffold_6965

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6965_1
CG_Bacteroid_01, Bacteroidetes, Bacteria

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1..384
DNA (384bp) protein (128aa)
Amino acid transport protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EFA7_9SPHI
amino acid permease-associated protein
Tax=CG_Bacteroid_01
SCNpilot_expt_500_bf_scaffold_6965_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(434..1648)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PS02_9DELT rbh
Porin {ECO:0000313|EMBL:KFA94456.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
phosphate-selective porin O and P rbh
SCNpilot_expt_500_bf_scaffold_6965_3
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1803..2303)
DNA (501bp) protein (167aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI00037D0342
radical SAM protein
SCNpilot_expt_500_bf_scaffold_6965_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2624..4189)
DNA (1566bp) protein (522aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-) rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABC83981.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABC83981.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHC6_ANADE rbh
SCNpilot_expt_500_bf_scaffold_6965_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4306..5064
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FS20_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95351.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_6965_6
unknown

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comp(5083..5856)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6965_7
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5868..6809)
DNA (942bp) protein (314aa)
Photosynthetic reaction centre cytochrome c subunit n=1 Tax=Thiocapsa marina 5811 RepID=F9UFF1_9GAMM
Photosynthetic reaction centre cytochrome c subunit {ECO:0000313|EMBL:EGV17188.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
OmpA/MotB domain-containing protein
Displaying 7 items

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