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SCNpilot_expt_500_bf_scaffold_9315

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9315_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1876)
DNA (1875bp) protein (625aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] rbh
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CAN97576.1};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYU7_SORC5 rbh
SCNpilot_expt_500_bf_scaffold_9315_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1993..2871)
DNA (879bp) protein (293aa)
Probable serine protease n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FT78_SORC5
serine protease
Probable serine protease {ECO:0000313|EMBL:CAN98501.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_9315_3
unknown

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comp(3237..3563)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9315_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4015..5079)
DNA (1065bp) protein (355aa)
leuB3; 3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] rbh
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CAN98321.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CAN98321.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
3-isopropylmalate dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FME3_SORC5 rbh
SCNpilot_expt_500_bf_scaffold_9315_5
unknown

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5156..5431
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9315_6
unknown

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5428..5856
DNA (429bp) protein (143aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9315_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5946..6638)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YGB9_SORCE
Putative hydrolase {ECO:0000313|EMBL:AKF09823.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9315_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6648..7760)
DNA (1113bp) protein (371aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ald; hypothetical protein; K00259 alanine dehydrogenase [EC:1.4.1.1] rbh
Alanine dehydrogenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FME8_SORC5 rbh
SCNpilot_expt_500_bf_scaffold_9315_9
unknown

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8024..8170
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_9315_10
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8113..8613)
DNA (501bp) protein (167aa)
Mcl-PHA depolymerase n=1 Tax=Pseudomonas alcaligenes RepID=Q84C08_PSEAC
Mcl-PHA depolymerase {ECO:0000313|EMBL:AAO73963.1}; Flags: Precursor;; TaxID=43263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes.;"
dipeptidyl aminopeptidase/acylaminoacyl-peptidase
Displaying 10 items

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