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SCNpilot_expt_500_bf_scaffold_8811

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8811_1
Eimeria praecox, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

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comp(1..1080)
DNA (1080bp) protein (360aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI86299.1}; TaxID=51316 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria praecox.;"
SCNpilot_expt_500_bf_scaffold_8811_2
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

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1260..1955
DNA (696bp) protein (232aa)
Tax=RBG_16_RIF05_58_8_curated
SCNpilot_expt_500_bf_scaffold_8811_3
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2004..3584
DNA (1581bp) protein (527aa)
Tax=GWD2_Desulfuromonadales_61_12_curated
SCNpilot_expt_500_bf_scaffold_8811_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3693..5087
DNA (1395bp) protein (465aa)
protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Protein kinase {ECO:0000313|EMBL:CAN92009.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN92009.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FNZ9_SORC5
SCNpilot_expt_500_bf_scaffold_8811_5
unknown

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comp(4938..6008)
DNA (1071bp) protein (357aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8811_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6369..6974
DNA (606bp) protein (202aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFY4_SORC5
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN98067.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_8811_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6971..7315
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y6N7_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41102.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_8811_8
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7497..7898
DNA (402bp) protein (134aa)
Adenylate/guanylate cyclase {ECO:0000313|EMBL:EGK89139.1}; EC=4.6.1.2 {ECO:0000313|EMBL:EGK89139.1};; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI00034A743A
family 3 adenylate cyclase
SCNpilot_expt_500_bf_scaffold_8811_9
unknown

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comp(8363..8455)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8811_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8499..9275
DNA (777bp) protein (259aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5T8_SORCE
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8811_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9374..10195)
DNA (822bp) protein (274aa)
Bacterial Ig-like domain protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXB9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF08152.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
Displaying 11 items

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