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SCNpilot_expt_500_bf_scaffold_5050

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5050_1
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1312
DNA (1311bp) protein (437aa)
protein kinase (EC:2.7.11.1) rbh
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8W3_SORC5 rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:EYF06928.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCNpilot_expt_500_bf_scaffold_5050_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1346..1753)
DNA (408bp) protein (136aa)
type VI secretion protein Vgr n=1 Tax=Variovorax paradoxus RepID=UPI000367CA2E
putative type VI secretion system protein, Vgr family
Putative type VI secretion system protein, Vgr family {ECO:0000313|EMBL:AGU47743.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_expt_500_bf_scaffold_5050_3
Komagataeibacter xylinus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1862..2440
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003029D84
RecA repressor protein RecX {ECO:0000313|EMBL:AHI26433.1}; TaxID=1296990 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter xylinus E25.;"
hypothetical protein; K03565 regulatory protein
SCNpilot_expt_500_bf_scaffold_5050_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2538..4472)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G2B6_SORC5
Uncharacterized protein {ECO:0000313|EMBL:EYF08149.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5050_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4741..5532
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAE9_MYXFH rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKF09479.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
enoyl-CoA hydratase/isomerase family protein rbh
SCNpilot_expt_500_bf_scaffold_5050_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5613..6155)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000360C331
Uncharacterized protein {ECO:0000313|EMBL:EYF00172.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5050_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6332..7834)
DNA (1503bp) protein (501aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA87986.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Uncharacterized protein id=3249703 bin=GWF2_Bacteroidetes_43_63 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
alkaline phosphatase
SCNpilot_expt_500_bf_scaffold_5050_8
unknown

Not on your lists

7917..8591
DNA (675bp) protein (225aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5050_9
unknown

Not on your lists

8883..9521
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5050_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9518..10825
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXA3_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP37144.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_5050_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10920..11708
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y618_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40269.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_5050_12
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11784..12158)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFC1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWM64872.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5050_13
Megasphaera elsdenii CAG:570, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12926..13726
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Megasphaera elsdenii CAG:570 RepID=R7MUW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF04964.1}; TaxID=1263087 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera; environmental samples.;" source="Megasphaera elsdenii CAG:570.;"
Displaying 13 items

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