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SCNpilot_expt_500_bf_scaffold_3525

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3525_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..769)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37556.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
SCNpilot_expt_500_bf_scaffold_3525_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(766..1539)
DNA (774bp) protein (258aa)
Glucosyltransferase-I n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GN82_SORC5
glucosyltransferase-I precursor
Glucosyltransferase-I {ECO:0000313|EMBL:CAN93546.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_3525_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1960..3132)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FFW9_SORC5
Tryptophan synthase alpha chain {ECO:0000313|EMBL:AKF03687.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3525_4
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3206..4027)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GJ87_9DELT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
SCNpilot_expt_500_bf_scaffold_3525_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4024..4587)
DNA (564bp) protein (188aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FLB3_SORC5
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AKF04632.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_bf_scaffold_3525_6
unknown

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comp(4620..5723)
DNA (1104bp) protein (368aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3525_7
unknown

Not on your lists

comp(5898..6536)
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3525_8
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6688..7518
DNA (831bp) protein (277aa)
2,5-didehydrogluconate reductase n=2 Tax=Brucella RepID=D1CZT7_9RHIZ rbh
yafB; oxidoreductase
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:EEZ33780.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
SCNpilot_expt_500_bf_scaffold_3525_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7518..8579
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XY42_SORCE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP36830.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_3525_10
unknown

Not on your lists

8649..8960
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3525_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9136..10866
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y501_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39899.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_3525_12
unknown

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10863..11276
DNA (414bp) protein (138aa)

This feature has no annotations

Displaying 12 items

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