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SCNpilot_expt_500_bf_scaffold_10954

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10954_1
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..237)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GD89_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM76164.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10954_2
unknown

Not on your lists

384..824
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10954_3
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(833..1795)
DNA (963bp) protein (321aa)
Polysaccharide deacetylase n=2 Tax=Streptomyces griseus RepID=G0Q7X3_STRGR
deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:EGE41817.1}; Flags: Precursor;; TaxID=649189 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus XylebKG-1.;"
SCNpilot_expt_500_bf_scaffold_10954_4
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2154..2798)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R165_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK27093.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_expt_500_bf_scaffold_10954_5
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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3171..3623
DNA (453bp) protein (151aa)
Cold-shock DNA-binding protein family n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M5P3_ANAVT
cold-shock DNA-binding protein family protein
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABA23693.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
SCNpilot_expt_500_bf_scaffold_10954_6
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3695..5641)
DNA (1947bp) protein (649aa)
Metallo-beta-lactamase family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CVZ7_MYXXD rbh
metallo-beta-lactamase family protein rbh
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ABF92296.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCNpilot_expt_500_bf_scaffold_10954_7
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5686..6693
DNA (1008bp) protein (336aa)
LysR family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7URJ6_MYXSD
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AGC49239.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCNpilot_expt_500_bf_scaffold_10954_8
unknown

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6757..7794
DNA (1038bp) protein (346aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10954_9
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7944..8939
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WM23_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:AKF11574.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
regulatory protein LuxR
SCNpilot_expt_500_bf_scaffold_10954_10
unknown

Not on your lists

8936..9163
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10954_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9936..10229
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WM23_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:AKF11574.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCNpilot_expt_500_bf_scaffold_10954_12
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10789..11313
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI000379DBEB
Uncharacterized protein {ECO:0000313|EMBL:KFF96758.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10954_13
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11326..11973)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8V0_MYXSD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGC45356.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Displaying 13 items

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