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SCNpilot_expt_500_bf_scaffold_16020

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_16020_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(1..489)
DNA (489bp) protein (163aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
SCNpilot_expt_500_bf_scaffold_16020_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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760..1401
DNA (642bp) protein (214aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Demethylmenaquinone methyltransferase n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NBC5_9ACTO
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SCNpilot_expt_500_bf_scaffold_16020_3
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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1398..2000
DNA (603bp) protein (201aa)
ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DY20_METI4
SCNpilot_expt_500_bf_scaffold_16020_4
unknown

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1997..2572
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_16020_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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2968..3657
DNA (690bp) protein (230aa)
radical SAM protein id=12557426 bin=CNBR_ACIDO species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCNpilot_expt_500_bf_scaffold_16020_6
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3654..5498
DNA (1845bp) protein (615aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMW4_ANADE rbh
Cyclic dehypoxanthine futalosine synthase {ECO:0000313|EMBL:GAO02547.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_16020_7
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5532..6767
DNA (1236bp) protein (412aa)
Amidohydrolase 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMW5_ANADE
amidohydrolase 1
Amidohydrolase 1 {ECO:0000313|EMBL:ABC80146.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCNpilot_expt_500_bf_scaffold_16020_8
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6767..6949
DNA (183bp) protein (61aa)
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029A646E
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:ADY52521.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying 8 items

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