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SCNpilot_expt_500_bf_scaffold_4879

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4879_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..2818
DNA (2817bp) protein (939aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YGN3_SORCE rbh
Uncharacterized protein {ECO:0000313|EMBL:AGP42038.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4879_2
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2832..3377)
DNA (546bp) protein (182aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09E30_STIAD
hypothetical protein; K08976 putative membrane protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO74759.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU70076.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCNpilot_expt_500_bf_scaffold_4879_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3459..4913)
DNA (1455bp) protein (485aa)
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESS1_SORC5 rbh
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715, ECO:0000313|EMBL:CAN97413.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_4879_4
unknown

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comp(4882..5487)
DNA (606bp) protein (202aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4879_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5526..7076
DNA (1551bp) protein (517aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C3L8_9BURK
lipid A ABC transporter ATPase/inner membrane protein MsbA
SCNpilot_expt_500_bf_scaffold_4879_6
unknown

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comp(7009..7710)
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4879_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7936..8913)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESP7_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97406.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_4879_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8966..10342
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ESP3_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97405.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_4879_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10436..10912
DNA (477bp) protein (159aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094K5_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO68606.1}; Uncharacterized protein {ECO:0000313|EMBL:EAU67166.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Displaying 9 items

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