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SCNpilot_expt_500_bf_scaffold_12015

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12015_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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60..1250
DNA (1191bp) protein (397aa)
alr; hypothetical protein; K01775 alanine racemase [EC:5.1.1.1] rbh
Alanine racemase {ECO:0000255|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000255|HAMAP-Rule:MF_01201};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Alanine racemase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=ALR_SORC5 rbh
SCNpilot_expt_500_bf_scaffold_12015_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1368..2132
DNA (765bp) protein (255aa)
Putative ABC transport system permease protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FSY0_SORC5
ABC ABC transporter permease; K02066 putative ABC transport system permease protein
Putative ABC transport system permease protein {ECO:0000313|EMBL:CAN98471.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_12015_3
unknown

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2902..3759
DNA (858bp) protein (286aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_12015_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3708..4763)
DNA (1056bp) protein (352aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Quinolinate synthase A n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK31_SORCE rbh
quinolinate synthetase rbh
SCNpilot_expt_500_bf_scaffold_12015_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4903..5208)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7X9_MYXSD
hypothetical protein; K02676 type IV pilus assembly protein PilZ
Uncharacterized protein {ECO:0000313|EMBL:AEI65963.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
SCNpilot_expt_500_bf_scaffold_12015_6
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5339..6871
DNA (1533bp) protein (511aa)
fadD3; AMP-dependent synthetase and ligase (EC:6.2.1.-) rbh
AMP-dependent synthetase and ligase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8N4_SORC5 rbh
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:AKF07078.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCNpilot_expt_500_bf_scaffold_12015_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6984..8405
DNA (1422bp) protein (474aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN95633.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN95633.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYM0_SORC5
SCNpilot_expt_500_bf_scaffold_12015_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8509..9495
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FDI9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN91766.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_12015_9
unknown

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9535..10101
DNA (567bp) protein (189aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_12015_10
unknown

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comp(10469..10939)
DNA (471bp) protein (157aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_12015_11
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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11164..11604
DNA (441bp) protein (147aa)
Histidine kinase {ECO:0000313|EMBL:KHD79264.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PAS domain S-box id=14626496 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
integral membrane sensor signal transduction histidine kinase
Displaying 11 items

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