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SCNpilot_expt_500_bf_scaffold_13604

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_13604_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1349
DNA (1347bp) protein (449aa)
AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
AMP-dependent synthetase and ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDJ1_ANADF
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS26787.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
SCNpilot_expt_500_bf_scaffold_13604_2
unknown

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comp(1413..1754)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_13604_3
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1935..2741
DNA (807bp) protein (269aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBD5_DEFDS
flhA; flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
SCNpilot_expt_500_bf_scaffold_13604_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2741..3931
DNA (1191bp) protein (397aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UG32_ANASK
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:GAO05527.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
SCNpilot_expt_500_bf_scaffold_13604_5
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3951..5006
DNA (1056bp) protein (352aa)
Flagellar biosynthetic protein FlhF n=1 Tax=Geobacter sp. (strain M18) RepID=E8WHY8_GEOS8
flagellar biosynthetic protein FlhF; K02404 flagellar biosynthesis protein FlhF
Flagellar biosynthetic protein FlhF {ECO:0000313|EMBL:ADW15613.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
SCNpilot_expt_500_bf_scaffold_13604_6
Enterobacteriaceae bacterium strain FGI 57, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5003..5719
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI000364AF44
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=693444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae.;" source="Enterobacteriaceae bacterium (strain FGI 57).;"
SCNpilot_expt_500_bf_scaffold_13604_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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5721..6443
DNA (723bp) protein (241aa)
Putative flagellar basal-body rod protein FlgG n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9A1_ACIC5
putative flagellar basal-body rod protein FlgG; K02391 flagellar basal-body rod protein FlgF
Putative flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:ACO33978.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_expt_500_bf_scaffold_13604_8
unknown

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6448..6750
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_13604_9
unknown

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6741..7046
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_13604_10
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7155..7736
DNA (582bp) protein (194aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Kosakonia sacchari SP1.;"
UPI0003AA0A8B related cluster n=1 Tax=unknown RepID=UPI0003AA0A8B
histidine kinase
SCNpilot_expt_500_bf_scaffold_13604_11
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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7687..8130
DNA (444bp) protein (148aa)
Sensory transduction protein kinase id=2910764 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
PAS sensor protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Displaying 11 items

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