ggKbase home page

SCNpilot_expt_500_bf_scaffold_7613

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7613_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..843
DNA (843bp) protein (281aa)
hycE; NAD-dependent dehydrogenase subunit (EC:1.-.-.-) rbh
NAD-dependent dehydrogenase subunit {ECO:0000313|EMBL:CAN94960.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAN94960.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
NAD-dependent dehydrogenase subunit n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FF67_SORC5 rbh
SCNpilot_expt_500_bf_scaffold_7613_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

843..1589
DNA (747bp) protein (249aa)
hycG; NAD-dependent dehydrogenase subunit (EC:1.-.-.-) rbh
NAD-dependent dehydrogenase subunit {ECO:0000313|EMBL:CAN94959.1}; EC=1.-.-.- {ECO:0000313|EMBL:CAN94959.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
NAD-dependent dehydrogenase subunit n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FF63_SORC5 rbh
SCNpilot_expt_500_bf_scaffold_7613_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2556..3722)
DNA (1167bp) protein (389aa)
Probable potassium transport system protein kup n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XK84_SORCE
trkD; potassium transporter Kup
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_7613_4

Not on your lists

3854..4291
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:EKE17467.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_expt_500_bf_scaffold_7613_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4527..5147
DNA (621bp) protein (207aa)
Thioredoxin family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G9Y8_SORC5
thioredoxin family protein
Thioredoxin family protein {ECO:0000313|EMBL:CAN99258.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_7613_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5178..6029)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y5X1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40807.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_7613_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6081..6728
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F4R1_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN97734.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_7613_8
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6886..7593
DNA (708bp) protein (236aa)
RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7G0_SORCE
hypothetical protein
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_expt_500_bf_scaffold_7613_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7590..8462
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF06465.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
SCNpilot_expt_500_bf_scaffold_7613_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8552..9433
DNA (882bp) protein (294aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNH8_SINAD
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AGA30919.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 10 items

View Taxonomy