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SCNpilot_expt_500_bf_scaffold_7732

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7732_1
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

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3..335
DNA (333bp) protein (111aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (EC:4.1.3.16); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase id=17503674 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Aminicenantes_66_30_curated
SCNpilot_expt_500_bf_scaffold_7732_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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332..1366
DNA (1035bp) protein (345aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] id=12556857 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCNpilot_expt_500_bf_scaffold_7732_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1405..2433
DNA (1029bp) protein (343aa)
Probable oxidoreductase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FCN7_SORC5 rbh
oxidoreductase rbh
Probable oxidoreductase {ECO:0000313|EMBL:CAN91682.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_7732_4
Burkholderia pyrrocinia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2452..3549)
DNA (1098bp) protein (366aa)
2-nitropropane dioxygenase (EC:1.13.12.16); K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
2-nitropropane dioxygenase, NPD n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B8E4_9BURK rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KFL50340.1}; TaxID=60550 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia pyrrocinia (Pseudomonas pyrrocinia).;"
SCNpilot_expt_500_bf_scaffold_7732_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3616..4101)
DNA (486bp) protein (162aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABS24247.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABS24247.1};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6A1_ANADF
SCNpilot_expt_500_bf_scaffold_7732_6
unknown

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comp(4167..4505)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7732_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4727..5314)
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF02869.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
RRM domain-containing RNA-binding protein id=3887071 bin=GWB1_Spirochaetes_59_5 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
RNA-binding protein
SCNpilot_expt_500_bf_scaffold_7732_8
unknown

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comp(5362..5499)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7732_9
unknown

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comp(5648..5980)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7732_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6231..6818
DNA (588bp) protein (196aa)
Putative hydrolase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GRT6_SORC5
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CAN93673.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying 10 items

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