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SCNpilot_expt_500_bf_scaffold_4285_10

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 9710..11065

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5C3_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 444.0
  • Bit_score: 459
  • Evalue 3.50e-126
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 444.0
  • Bit_score: 459
  • Evalue 1.10e-126
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CAN99009.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 444.0
  • Bit_score: 459
  • Evalue 4.80e-126

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
GTGGACCTCTCGGCAAGTCCGGGCGTTGTGAAGGAAAGAGCGAGCGGCGTGTCGACTGTGCTCATCGTCGACGACCAGGAGGCGGTGCGCGAGGCGCTCGAGCTCTTGCTCGAGGTCCACGGCCTGCGCGCCGAGAGCGTCGCCGGCGCCGAGGAGGCGCTCGCGCGCATCCGGCAGGGCGGGGTCGCGGCCGTCGTGCAGGACATGAATTTCAGTCGCGACACGACATCGGGCGAGGAGGGGATCGAGCTCTTCCGCCGCATCCGGGCGATCCTCCCGACGATGCCGGTCCTCCTCATGACGGCGTGGACCTCGCTCGAGACGGCCGTCGCCCTCGTTCGCGAGGGCGCGGTCGACTACGTGCAGAAGCCGTGGAACGACGACAAGCTCGTCGCTTCGCTGAAGAACCTCGTCCGCCTGCGCGAGCTCCAGCTCGAGAACGAGCGTCTGCGCGCGGCCGCGCAACTCGATCGTGAGACCCTCGCCAGCGCCCATGACCTTCGCGGTCTCGTGTACGTGAGCTCGGTGATGCACCGCACGGTCGAGCTCGCGCTCCGCGTGGCGGCGTCCGATGCGCCCATCCTCGTTCTCGGCCCGAACGGCTCAGGCAAGGAGAAGCTCGCCGAGATCATCGCGTACAGCTCGCGGCGGAAGGACCGCCCGTTCGTCCGCGTCAACGCGGGGGCGATCCCGGACGCGCTCCTCGAGAGCGAGCTGTTCGGCGTCGAGGCCGGCGCCTTCACCGGCGCGACCAAGTCTCGCGGAGGGCATTTCGAGGCCGCCCACGGCGGCACGCTCTTCCTCGACGAGATCGGCAACCTCTCGCTCGCAGGACAGCAGAAGCTCCTGCGCGTTCTCCAGACCGGCGAGCTCCAGCGTCTCGGCAGCTCGCAGCTCCGGCGGGTCGACGTGCGCGTCATCAGCGCGACGAACGAGGACCTCCGCGCGGCGATCGCGAACAAGACGTTTCGCGAGGACCTCTATTTCCGACTCAACGTGGTGGAGCTGACGCTACCGCGCCTGGCCGAGCGATCGGAGGACATCTTGCCGCTGGCCGAGGCCTTCCTCGCGCGCACGGCGAGCCCACACGAGCTCTCCGACGCCGCACGACGCGCACTGGCGAAGCACGACTACCCGGGCAACGTTCGCGAGCTCGAGAACCGGATCACGCGCGCCACGCTCGTATGTCATGGCGGCGTCATTCAGCCCGCGGACCTCGGCCTCGAGAGCGCCGACGCCGGGCGGCCGCGAGAGATCACGCTGGAGCAGGACGCGATCGCGCGAGCCCTCGCCGAGCACGACGGGAACATCTCGCGGGCGGCGGCGCAGCTCGGCGNNNNNNNNNNNTGGTCGTGA
PROTEIN sequence
Length: 452
VDLSASPGVVKERASGVSTVLIVDDQEAVREALELLLEVHGLRAESVAGAEEALARIRQGGVAAVVQDMNFSRDTTSGEEGIELFRRIRAILPTMPVLLMTAWTSLETAVALVREGAVDYVQKPWNDDKLVASLKNLVRLRELQLENERLRAAAQLDRETLASAHDLRGLVYVSSVMHRTVELALRVAASDAPILVLGPNGSGKEKLAEIIAYSSRRKDRPFVRVNAGAIPDALLESELFGVEAGAFTGATKSRGGHFEAAHGGTLFLDEIGNLSLAGQQKLLRVLQTGELQRLGSSQLRRVDVRVISATNEDLRAAIANKTFREDLYFRLNVVELTLPRLAERSEDILPLAEAFLARTASPHELSDAARRALAKHDYPGNVRELENRITRATLVCHGGVIQPADLGLESADAGRPREITLEQDAIARALAEHDGNISRAAAQLGXXXXWS*