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SCNpilot_expt_500_bf_scaffold_4285

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4285_1
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1023
DNA (1023bp) protein (341aa)
ABC transporter-like protein; K14165 dual specificity phosphatase [EC:3.1.3.16 3.1.3.48]
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000364DE84
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_500_bf_scaffold_4285_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1013..1417
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J6J9_COMT2
Uncharacterized protein {ECO:0000313|EMBL:KGH31372.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4285_3
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1604..3223
DNA (1620bp) protein (540aa)
Ferredoxin reductase id=2941011 bin=GWF1_Xanthomonadales_69_6 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
oxygenase
Tax=GWA2_Rhodocyclales_65_20_curated
SCNpilot_expt_500_bf_scaffold_4285_4
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3220..3804
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2B2_SORCE
Uncharacterized protein {ECO:0000313|EMBL:EYF02904.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4285_5
unknown

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comp(3968..4315)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4285_6
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4780..5214)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0D8_SORCE
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EYF07939.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4285_7
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5216..5920)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XYS5_SORCE
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:EYF07938.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4285_8
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6136..8787
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMC7_SORC5 rbh
TonB family protein / TonB-dependent receptor {ECO:0000313|EMBL:EYF04317.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4285_9
unknown

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8784..9740
DNA (957bp) protein (319aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4285_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9710..11065
DNA (1356bp) protein (452aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5C3_SORC5
sigma-54 dependent DNA-binding response regulator
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CAN99009.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_expt_500_bf_scaffold_4285_11
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11062..11979
DNA (918bp) protein (306aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
two-component system sensor histidine kinase (EC:2.7.3.-)
Two-component system sensor histidine kinase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5C2_SORC5
Displaying 11 items

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