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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_BF_STEP10_Deltaproteobacteria_68_5
In projects: SCNPILOT_EXPT_500_BF_STEP10

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_bf_step10_UNK

Properties

Avg. coverage: 4.54 Longest contig: 26.86 Kbp Bin length: 7.09 Mbp GC content: 68.00 %
Contigs count: 1996 Features count: 7793 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Displaying items 1701-1750 of 1996 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_bf_scaffold_13184
Species: GWA2_Rokubacteria_73_35_curated (50%)
2 2657 bp 69.82 5.27 98.34
SCNpilot_expt_500_bf_scaffold_13185
Species: Streptococcus parasanguinis (50%)
2 2657 bp 71.21 5.18 100.04
SCNpilot_expt_500_bf_scaffold_21865
Species: Methylocystis sp. SC2 (50%)
2 1622 bp 69.05 4.01 85.08
SCNpilot_expt_500_bf_scaffold_21098 2 1678 bp 72.35 3.58 96.72
SCNpilot_expt_500_bf_scaffold_32283
Species: CG_Elusi_04 (50%)
2 1875 bp 69.07 4.00 61.76
SCNpilot_expt_500_bf_scaffold_31667
Species: Streptomyces sp. HCCB10043 (50%)
2 1592 bp 67.15 4.24 85.36
SCNpilot_expt_500_bf_scaffold_40683
Species: Pseudomonas amygdali (100%)
2 1414 bp 61.67 2.65 99.29
SCNpilot_expt_500_bf_scaffold_15181
Species: Sorangium cellulosum (50%)
2 2887 bp 69.31 4.59 77.83
SCNpilot_expt_500_bf_scaffold_15437
Species: R_OP11_Woesebacteria_39_10b (50%)
2 2283 bp 70.83 4.38 95.14
SCNpilot_expt_500_bf_scaffold_11806
Species: Sorangium cellulosum (50%)
2 2931 bp 67.89 4.61 99.59
SCNpilot_expt_500_bf_scaffold_32031
Species: Chondromyces apiculatus (50%)
2 1093 bp 70.45 3.20 76.30
SCNpilot_expt_500_bf_scaffold_22839
Species: RBG_19FT_COMBO_Aminicenantes_58_17_curated (50%)
2 1557 bp 67.18 4.34 88.82
SCNpilot_expt_500_bf_scaffold_32544
Species: Desulfatibacillum alkenivorans (50%)
2 1065 bp 66.29 3.29 86.76
SCNpilot_expt_500_bf_scaffold_21872
Species: Desulfatibacillum alkenivorans (50%)
2 1622 bp 68.25 3.39 73.61
SCNpilot_expt_500_bf_scaffold_25768
Species: GWF2_Lentisphaerae_50_93_curated (50%)
2 1389 bp 65.44 3.06 78.83
SCNpilot_expt_500_bf_scaffold_18753
Species: Sorangium cellulosum (100%)
2 3602 bp 70.60 4.86 91.78
SCNpilot_expt_500_bf_scaffold_30921
Species: marine sediment metagenome (50%)
2 1151 bp 68.90 4.13 94.61
SCNpilot_expt_500_bf_scaffold_13706
Species: Sandaracinus amylolyticus (50%)
2 2560 bp 68.28 5.08 89.41
SCNpilot_expt_500_bf_scaffold_26899
Species: Sandaracinus amylolyticus (50%)
2 1336 bp 73.13 5.24 100.15
SCNpilot_expt_500_bf_scaffold_11555
Species: Anaeromyxobacter dehalogenans (50%)
2 4143 bp 68.02 4.59 94.86
SCNpilot_expt_500_bf_scaffold_17211
Species: Chondromyces apiculatus (50%)
2 2651 bp 65.30 4.34 47.08
SCNpilot_expt_500_bf_scaffold_29172
Species: Sorangium cellulosum (50%)
2 1232 bp 67.61 3.25 83.77
SCNpilot_expt_500_bf_scaffold_18244
Species: Sorangium cellulosum (50%)
2 1931 bp 69.60 3.63 62.30
SCNpilot_expt_500_bf_scaffold_17724
Species: Chondromyces apiculatus (50%)
2 1988 bp 67.66 4.90 91.75
SCNpilot_expt_500_bf_scaffold_14493
Species: Bacillus sp. BH072 (50%)
2 2428 bp 68.29 5.66 100.08
SCNpilot_expt_500_bf_scaffold_24599 2 1454 bp 61.49 4.13 59.63
SCNpilot_expt_500_bf_scaffold_31423 2 1126 bp 68.47 5.99 50.36
SCNpilot_expt_500_bf_scaffold_21112 2 2651 bp 67.33 4.90 96.30
SCNpilot_expt_500_bf_scaffold_26904
Species: Sorangium cellulosum (50%)
2 1336 bp 73.65 6.36 97.68
SCNpilot_expt_500_bf_scaffold_15448
Species: Sorangium cellulosum (50%)
2 2281 bp 69.44 3.51 86.94
SCNpilot_expt_500_bf_scaffold_16800
Species: Sorangium cellulosum (100%)
2 2097 bp 67.72 5.01 83.83
SCNpilot_expt_500_bf_scaffold_32809
Species: Chondromyces apiculatus (50%)
2 1052 bp 65.11 3.56 75.00
SCNpilot_expt_500_bf_scaffold_17729
Species: Sorangium cellulosum (50%)
2 1987 bp 70.66 5.03 91.65
SCNpilot_expt_500_bf_scaffold_12897
Species: Sandaracinus amylolyticus (50%)
2 2708 bp 71.01 4.15 100.26
SCNpilot_expt_500_bf_scaffold_20018
Species: Sorangium cellulosum (100%)
2 3303 bp 65.46 5.00 84.56
SCNpilot_expt_500_bf_scaffold_30418
Species: Myxococcus fulvus (50%)
2 1175 bp 68.94 4.68 93.96
SCNpilot_expt_500_bf_scaffold_33442 2 1021 bp 64.15 3.92 77.28
SCNpilot_expt_500_bf_scaffold_15962
Species: Caulobacter sp. K31 (50%)
2 2209 bp 56.50 3.96 80.94
SCNpilot_expt_500_bf_scaffold_25778
Species: Chloroflexus aggregans (50%)
2 1389 bp 71.06 3.78 100.22
SCNpilot_expt_500_bf_scaffold_18252
Species: Flavobacterium sp. AED (50%)
2 1929 bp 67.65 3.63 99.38
SCNpilot_expt_500_bf_scaffold_20276
Species: Sphaerobacter thermophilus (50%)
2 1743 bp 66.78 5.02 77.97
SCNpilot_expt_500_bf_scaffold_20277
Species: Caldilinea aerophila (50%)
2 1742 bp 71.53 3.73 86.62
SCNpilot_expt_500_bf_scaffold_26141 2 1371 bp 63.09 3.65 101.75
SCNpilot_expt_500_bf_scaffold_31174
Species: Sorangium cellulosum (50%)
2 1138 bp 72.32 4.39 86.20
SCNpilot_expt_500_bf_scaffold_16550
Species: Sorangium cellulosum (50%)
2 2133 bp 69.34 4.57 99.58
SCNpilot_expt_500_bf_scaffold_44002
Species: Myxococcus fulvus (50%)
2 1478 bp 55.07 4.23 49.73
SCNpilot_expt_500_bf_scaffold_16553
Species: Sorangium cellulosum (50%)
2 2133 bp 68.07 4.10 86.08
SCNpilot_expt_500_bf_scaffold_22601
Species: Sorangium cellulosum (50%)
2 1573 bp 64.91 5.40 57.41
SCNpilot_expt_500_bf_scaffold_13466
Species: Monoraphidium neglectum (50%)
2 3306 bp 68.51 4.61 90.38
SCNpilot_expt_500_bf_scaffold_18514
Species: Sorangium cellulosum (50%)
2 1903 bp 69.00 5.91 94.90
Displaying items 1701-1750 of 1996 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.