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SCNPILOT_EXPT_750_BF_Myxococcales_68_20

SCNPILOT_EXPT_500_BF_STEP10_Deltaproteobacteria_68_5
In projects: SCNPILOT_EXPT_500_BF_STEP10

Consensus taxonomy: Deltaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_bf_step10_UNK

Properties

Avg. coverage: 4.54 Longest contig: 26.86 Kbp Bin length: 7.09 Mbp GC content: 68.00 %
Contigs count: 1996 Features count: 7793 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Displaying items 1751-1800 of 1996 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_bf_scaffold_20538
Species: uncultured marine group II/III euryarchaeote SAT1000_14_B08 (50%)
2 1721 bp 67.64 3.92 91.34
SCNpilot_expt_500_bf_scaffold_22858
Species: Sorangium cellulosum (100%)
2 1556 bp 68.77 4.18 100.06
SCNpilot_expt_500_bf_scaffold_15203
Species: RBG_16_Anaeromyxobacter_69_14_curated (50%)
2 2316 bp 68.91 3.99 100.00
SCNpilot_expt_500_bf_scaffold_30940
Species: Cystobacter fuscus (50%)
2 1150 bp 68.78 3.48 82.96
SCNpilot_expt_500_bf_scaffold_16044
Species: Chloroflexus aggregans (50%)
2 2198 bp 68.65 4.09 100.05
SCNpilot_expt_500_bf_scaffold_21637
Species: Streptomyces sp. AcH 505 (50%)
2 1640 bp 69.39 3.51 86.16
SCNpilot_expt_500_bf_scaffold_30429 2 1175 bp 70.47 4.04 99.06
SCNpilot_expt_500_bf_scaffold_24102
Species: Haliangium ochraceum (50%)
2 1482 bp 68.08 5.74 91.70
SCNpilot_expt_500_bf_scaffold_17230
Species: Chondromyces apiculatus (100%)
2 2043 bp 69.31 5.26 99.12
SCNpilot_expt_500_bf_scaffold_25022
Species: Hyalangium minutum (50%)
2 1430 bp 68.53 3.85 98.18
SCNpilot_expt_500_bf_scaffold_24871
Species: Chondromyces apiculatus (50%)
2 1439 bp 68.45 3.65 80.89
SCNpilot_expt_500_bf_scaffold_21127
Species: Pseudomonas aeruginosa (50%)
2 1676 bp 65.10 4.18 91.29
SCNpilot_expt_500_bf_scaffold_23375
Species: Sorangium cellulosum (50%)
2 1524 bp 68.37 3.12 94.88
SCNpilot_expt_500_bf_scaffold_29192
Species: Mycobacterium tuberculosis (50%)
2 1232 bp 70.37 4.26 84.98
SCNpilot_expt_500_bf_scaffold_17744
Species: Corallococcus coralloides (50%)
2 1985 bp 70.73 3.15 90.68
SCNpilot_expt_500_bf_scaffold_20545
Species: Chondromyces apiculatus (50%)
2 1720 bp 64.65 4.94 100.12
SCNpilot_expt_500_bf_scaffold_33201 2 1033 bp 65.34 4.11 87.71
SCNpilot_expt_500_bf_scaffold_17489
Species: Sandaracinus amylolyticus (50%)
2 2015 bp 66.65 4.84 69.53
SCNpilot_expt_500_bf_scaffold_20290
Species: Sorangium cellulosum (50%)
2 1742 bp 67.62 4.59 100.23
SCNpilot_expt_500_bf_scaffold_28082 2 1282 bp 66.93 4.49 64.59
SCNpilot_expt_500_bf_scaffold_15466
Species: BJP_IG2102_Ignavibacteriales_35_8 (50%)
2 2279 bp 68.76 3.95 87.14
SCNpilot_expt_500_bf_scaffold_22098
Species: Chloroflexus aurantiacus (100%)
2 1607 bp 68.14 3.89 93.53
SCNpilot_expt_500_bf_scaffold_29195
Species: Corallococcus coralloides (50%)
2 1231 bp 70.11 4.47 93.10
SCNpilot_expt_500_bf_scaffold_29963
Species: Sorangium cellulosum (50%)
2 1195 bp 71.13 7.32 95.65
SCNpilot_expt_500_bf_scaffold_11323
Species: Sorangium cellulosum (50%)
2 3044 bp 67.28 4.85 99.74
SCNpilot_expt_500_bf_scaffold_15723
Species: Chondromyces apiculatus (50%)
2 2241 bp 68.50 5.91 85.94
SCNpilot_expt_500_bf_scaffold_14259
Species: Devosia sp. DDB001 (50%)
2 2465 bp 68.84 5.88 93.83
SCNpilot_expt_500_bf_scaffold_31188
Species: Rhodococcus opacus (50%)
2 1138 bp 66.87 5.27 92.53
SCNpilot_expt_500_bf_scaffold_16564
Species: Sorangium cellulosum (50%)
2 2131 bp 67.57 4.81 88.55
SCNpilot_expt_500_bf_scaffold_21645
Species: Sorangium cellulosum (50%)
2 1639 bp 68.70 3.36 96.83
SCNpilot_expt_500_bf_scaffold_26669
Species: Sandaracinus amylolyticus (50%)
2 1346 bp 69.76 3.71 99.41
SCNpilot_expt_500_bf_scaffold_30437
Species: Chondromyces apiculatus (50%)
2 1174 bp 68.48 4.26 97.36
SCNpilot_expt_500_bf_scaffold_28598
Species: GWC2_Elusimicrobia_65_9_curated (50%)
2 1257 bp 67.86 4.57 100.00
SCNpilot_expt_500_bf_scaffold_31702 2 1109 bp 69.88 9.02 88.19
SCNpilot_expt_500_bf_scaffold_29711 2 1207 bp 66.78 2.49 111.35
SCNpilot_expt_500_bf_scaffold_13223
Species: Chondromyces apiculatus (50%)
2 4934 bp 71.69 4.71 78.92
SCNpilot_expt_500_bf_scaffold_21135
Species: Hyalangium minutum (50%)
2 2304 bp 65.36 3.91 77.73
SCNpilot_expt_500_bf_scaffold_33720
Species: Deinococcus swuensis (50%)
2 1008 bp 69.54 3.22 90.48
SCNpilot_expt_500_bf_scaffold_31193
Species: Chondromyces apiculatus (50%)
2 1655 bp 69.06 3.47 71.06
SCNpilot_expt_500_bf_scaffold_25033
Species: Sorangium cellulosum (50%)
2 1429 bp 72.78 4.37 98.67
SCNpilot_expt_500_bf_scaffold_20298
Species: Sphaerobacter thermophilus (50%)
2 1741 bp 68.29 3.30 93.22
SCNpilot_expt_500_bf_scaffold_22362 2 2407 bp 68.18 3.53 53.47
SCNpilot_expt_500_bf_scaffold_24883 2 1438 bp 67.73 4.52 79.07
SCNpilot_expt_500_bf_scaffold_28092
Species: Sorangium cellulosum (50%)
2 1910 bp 65.45 4.32 83.09
SCNpilot_expt_500_bf_scaffold_15220
Species: Sorangium cellulosum (50%)
2 2314 bp 71.48 4.43 93.22
SCNpilot_expt_500_bf_scaffold_25292
Species: marine sediment metagenome (50%)
2 1414 bp 67.89 2.83 73.20
SCNpilot_expt_500_bf_scaffold_11333
Species: Sorangium cellulosum (100%)
2 3693 bp 71.00 5.42 70.67
SCNpilot_expt_500_bf_scaffold_8613
Species: Sorangium cellulosum (50%)
2 3836 bp 69.84 3.78 93.77
SCNpilot_expt_500_bf_scaffold_19181
Species: Chondromyces apiculatus (50%)
2 1838 bp 72.20 4.49 97.61
SCNpilot_expt_500_bf_scaffold_6286
Species: Microcystis aeruginosa (50%)
2 4832 bp 68.07 4.60 95.99
Displaying items 1751-1800 of 1996 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.