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SCNpilot_expt_500_bf_scaffold_8956

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8956_1
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2..382
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAJ6_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:KIC76845.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8956_2
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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387..941
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RAJ5_9CHLA
Uncharacterized protein {ECO:0000313|EMBL:KIC76846.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8956_3
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1053..1463
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1N1_PARAV
hypothetical protein
Putative sigma regulatory factor-histidine kinase {ECO:0000313|EMBL:CDR33036.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
SCNpilot_expt_500_bf_scaffold_8956_4
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1481..1897)
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YS24_WADCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI38869.1}; TaxID=716544 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044).;"
SCNpilot_expt_500_bf_scaffold_8956_5
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2169..3356
DNA (1188bp) protein (396aa)
D-alanyl-D-alanine carboxypeptidase DacB {ECO:0000313|EMBL:KIC76838.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KIC76838.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
dacC; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] rbh
D-alanyl-D-alanine carboxypeptidase dacF n=2 Tax=Waddlia chondrophila RepID=F8LB65_9CHLA rbh
SCNpilot_expt_500_bf_scaffold_8956_6
unknown

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3382..3783
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8956_7
unknown

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3815..4201
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8956_8
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(4168..5028)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1478174 species="Bacteria; Chlamydiae; C
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] rbh
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RSMA_PARUW rbh
SCNpilot_expt_500_bf_scaffold_8956_9
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(5035..5979)
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Parachlamydia acanthamoebae RepID=F8L1M6_PARAV rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC72688.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein rbh
Displaying 9 items

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