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SCNpilot_expt_500_bf_scaffold_5780

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5780_1
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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2..538
DNA (537bp) protein (179aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
truA1; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LB99_9CHLA
SCNpilot_expt_500_bf_scaffold_5780_2
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(642..1310)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEE6_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC72485.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5780_3
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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1343..2167
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R654_9CHLA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC75500.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5780_4
unknown

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2335..3975
DNA (1641bp) protein (547aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5780_5
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(4058..6586)
DNA (2529bp) protein (843aa)
Putative poly(Beta-D-mannuronate) O-acetylase {ECO:0000313|EMBL:KIC72489.1}; EC=2.3.1.- {ECO:0000313|EMBL:KIC72489.1};; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
Alginate O-acetylation protein / membrane bound O-acyl transferase, MBOAT n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G0D1_9CYAN rbh
putative membrane protein involved in D-alanine export rbh
SCNpilot_expt_500_bf_scaffold_5780_6
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(6589..8439)
DNA (1851bp) protein (617aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCR8_PARUW rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC72490.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5780_7
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(8436..9707)
DNA (1272bp) protein (424aa)
Putative membrane protein n=1 Tax=Waddlia chondrophila 2032/99 RepID=F8LEM8_9CHLA
Putative membrane protein {ECO:0000313|EMBL:KIC75496.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5780_8
Neochlamydia sp. TUME1, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(9713..10642)
DNA (930bp) protein (310aa)
Probable rhamnosyltransferase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCS1_PARUW
Putative rhamnosyltransferase {ECO:0000313|EMBL:KIC72492.1}; TaxID=1478174 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. TUME1.;"
rgpB; rhamnosyltransferase
SCNpilot_expt_500_bf_scaffold_5780_9
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(10639..11418)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MCR9_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC75494.1}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
hypothetical protein
Displaying 9 items

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