ggKbase home page

SCNpilot_expt_500_bf_scaffold_3544

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3544_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..726
DNA (726bp) protein (242aa)
PfkB domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Z3_9MICO rbh
PfkB domain protein {ECO:0000313|EMBL:EIC07932.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ribokinase-like domain-containing protein
SCNpilot_expt_500_bf_scaffold_3544_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

770..1081
DNA (312bp) protein (104aa)
Antibiotic biosynthesis monooxygenase n=2 Tax=Microbacterium RepID=H8E4Z2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86438.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3544_3
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1078..1953
DNA (876bp) protein (292aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
tRNA pseudouridine synthase A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWI7_9MICO rbh
SCNpilot_expt_500_bf_scaffold_3544_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2034..2723
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ADP2_9MICO rbh
Exonuclease {ECO:0000313|EMBL:EXJ51160.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
exonuclease III
SCNpilot_expt_500_bf_scaffold_3544_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2809..3660
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AI27_9MICO rbh
Universal stress protein UspA {ECO:0000313|EMBL:KIC59354.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
UspA domain-containing protein
SCNpilot_expt_500_bf_scaffold_3544_6
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3740..4252)
DNA (513bp) protein (171aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Microbacterium RepID=H8E4Y8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59355.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
PKD repeat
SCNpilot_expt_500_bf_scaffold_3544_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4458..5078
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E4Y7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EXJ51157.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3544_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5168..5899
DNA (732bp) protein (244aa)
Archaeal fructose-1,6-bisphosphatase n=2 Tax=Microbacterium RepID=H8E4Y6_9MICO rbh
Archaeal fructose-1,6-bisphosphatase {ECO:0000313|EMBL:EIC07925.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
archaeal fructose-1,6-bisphosphatase
SCNpilot_expt_500_bf_scaffold_3544_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5930..7543
DNA (1614bp) protein (538aa)
Glycosyl transferase family 2 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Y5_9MICO
Glycosyl transferase {ECO:0000313|EMBL:KIC59358.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
glycosyltransferase, probably
SCNpilot_expt_500_bf_scaffold_3544_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7513..7866)
DNA (354bp) protein (118aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Y4_9MICO
Chemotaxis protein CheY {ECO:0000313|EMBL:KIC59424.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_expt_500_bf_scaffold_3544_11
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7868..8665)
DNA (798bp) protein (266aa)
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4Y4_9MICO
Response regulator receiver {ECO:0000313|EMBL:EIC07923.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying 11 items

View Taxonomy