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SCNpilot_expt_500_bf_scaffold_8208

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8208_1
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..901)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI0003749B01
Uncharacterized protein {ECO:0000313|EMBL:AIL12803.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
proline/betaine transporter
SCNpilot_expt_500_bf_scaffold_8208_2
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1208..1480)
DNA (273bp) protein (91aa)
Fosmidomycin resistance protein n=1 Tax=Legionella pneumophila str. Leg01/53 RepID=U1SB23_LEGPN
hypothetical protein
Glutathione transferase FosA {ECO:0000313|EMBL:GAN25664.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
SCNpilot_expt_500_bf_scaffold_8208_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2305..3282)
DNA (978bp) protein (326aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
uvrD; DNA helicase II; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EKU0_9BACT
SCNpilot_expt_500_bf_scaffold_8208_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4143..4445)
DNA (303bp) protein (101aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
DNA helicase II protein; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
UPI0003D057EE related cluster n=1 Tax=unknown RepID=UPI0003D057EE
SCNpilot_expt_500_bf_scaffold_8208_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4577..5056)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9R9_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:AIL12800.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8208_6
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5056..5547)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000381C00A
Type II/IV secretion system protein TadC, Flp pilus assembly
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_bf_scaffold_8208_7
unknown

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comp(5496..5987)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8208_8
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5993..6976)
DNA (984bp) protein (328aa)
Type II secretion system F domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QAR9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AIL12799.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Flp pilus assembly protein TadB; K12510 tight adherence protein B
SCNpilot_expt_500_bf_scaffold_8208_9
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6973..8391)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF92_9BACT rbh
putative type II/IV secretion system protein; K02283 pilus assembly protein CpaF
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
SCNpilot_expt_500_bf_scaffold_8208_10
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8450..9553)
DNA (1104bp) protein (368aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12798.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Two-component response regulator id=4908865 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum sp. genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
two-component response regulator; K02282 pilus assembly protein CpaE
Displaying 10 items

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