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SCNpilot_expt_500_bf_scaffold_19133

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_19133_1
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..551
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034B6B16
Uncharacterized protein {ECO:0000313|EMBL:KGM40489.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_19133_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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726..1394
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12749.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
SCNpilot_expt_500_bf_scaffold_19133_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1563..2888
DNA (1326bp) protein (442aa)
signal recognition particle n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8A2
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
ffh; GTPase of the signal recognition particle; K03106 signal recognition particle subunit SRP54
SCNpilot_expt_500_bf_scaffold_19133_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2924..3406
DNA (483bp) protein (161aa)
30S ribosomal protein S16 n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DW51_9PROT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16
SCNpilot_expt_500_bf_scaffold_19133_5
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3500..4021
DNA (522bp) protein (174aa)
Ribosome maturation factor RimM n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVP2_9RHOB
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
SCNpilot_expt_500_bf_scaffold_19133_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4021..4155
DNA (135bp) protein (45aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWN4_9PROT
Displaying 6 items

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