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SCNpilot_expt_500_bf_scaffold_3121_5

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 3871..5655

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AIK96266.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 510.0
  • Bit_score: 742
  • Evalue 3.80e-211
Multidrug resistance protein Atm1 id=4064194 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6 similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 579.0
  • Bit_score: 536
  • Evalue 3.80e-149
  • rbh
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 587.0
  • Bit_score: 429
  • Evalue 1.60e-117

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Taxonomy

Candidatus Paracaedibacter acanthamoebae → Candidatus Paracaedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
ATGCAAGAAAGATTCAAAAATCTAAGATTTTTAAGAGAGATATTTCCTTTGTTATGGGCAAAAGAAGAAAAAATACGCCGTTTATTTCTTCTGTCCTTTGGGTTAGTCTTTGTCTCAATTAGCCTCGACCTTAGCATTCCCATTGTATTAAAGGCGGTTGTCTCTAAGCTTTCAACTCCTGGGAAAAGTATGACTTATCAATTATCCTTATTATTAGTAGCCTATGGAGTTATTTGGATGTTATCTCAAACAATCCAAAATGTAAGGCAGATTATCATGGTCAGACCCTTAGAAAGATGTATCCGACTTTTCTGCTCTCAGTTGTTTAATCATCTTCATTCGTTACCTATGAAATTTCATTTGGATAGAAAGACGGGAGCTATTACCAATGCTTTGGAGCGTGCTCAATATGGATTTCCAGATGTTTTCTGGGGGCTATTTTTATTTGTTATTCCTACACTCATCGAGTTATGTTTAGCAGCTACGATTTTATGTTACTACTATGGGGCTCTTTATGGTGTCATCTTACTTTCTGTAGCCACTACTTTCATTATATTTACTCACCATGCAACGGAATGGTCCTCTCATTTTCAAACCTTAAGCAATGATCAACAATCCCAAACTAATGCGAACATTGTTGATAGCCTTTTAAACTTTGCAAGTGTTAAGCATTTTAATAATAAAAAATATGAAACTTTAAAGTGTGATAAATATCTTAAAGAAAGAGAGAATCTTCTTATTAAATCTATATCAAGCATGGAATATGTTCGCATCGGTCAAAATATTATTATAGGAATAGGACTAATTTTACTCACGTATACAGCAGGCCAACAAATTCTATCAAGTGTTTATGATATCAGTGATTTCATTCTCATTAATGGATATATTTTACAATTTGTAGCTCCCTTAGGTCACATAGGGTTTATAACTCGAGATATAAGAAGAGGAATGAATGAACTAGCCAGCATAGCGGATATTTTAAGGATAAAACCGGAAACCCTCGTATCCTCTGAAAAGGTTTATCCTTTAAAAAGGTTAAAGAGTATTGAATTTCAAAATGTTTCCTTCGGATATGAGCCAGAACGATCAGTTCTTAAAGATATTAGTTTTTACCTTGAGGAAGGAAAAACCCTTGGTATTGTGGGAGCAACAGGCTCAGGCAAATCAACAATTTCTAATTTGCTTTTTAAATTTTATAATACAAGTTCAGGAAGAATTTTAATCAATAATCAAGACATTGAAAATTTTAATACAGAACAATTATCTCATTTAATAGGGATTGTTCCACAAGATATTACATTATTTAATACAACAATTTATGAAAATATTCTTTTTGCTCGTCCAAGTGCTCACAAAGAGGAGGTAGAGGAAGTGGTCAAGCTTGTTCATCTTGATTCTGTCTTAAAAAGGCTCCCTCATCACTATGATACAGTAGTAGGAGAGAGAGGCCTAAAACTTTCAGGTGGAGAAAAACAAAGAATTGCTATAGCTAGAGCTCTTTTAAAAAGATCTTCCTTATATATTTTTGACGAAGCTACCTCGTCCTTAGATCTTGGAACAGAAGAAACTATTATGACAAATATTGCCCCTTTCTTAAAAAAATCTACAACAATTATTATTGCCCATCGTTTATCCACTGTCGTCAATGTTGATGAAATCCTTGTCTTTCAGCATGGGATAATAGAAGAAAGAGGATCACACCCCTCTCTTTTAAAACAGAAGGGGCTCTATGCCTCCCTATGGAAAACACATGAAAAAGCCCAAAGGAAATCCCATGCAGCATGA
PROTEIN sequence
Length: 595
MQERFKNLRFLREIFPLLWAKEEKIRRLFLLSFGLVFVSISLDLSIPIVLKAVVSKLSTPGKSMTYQLSLLLVAYGVIWMLSQTIQNVRQIIMVRPLERCIRLFCSQLFNHLHSLPMKFHLDRKTGAITNALERAQYGFPDVFWGLFLFVIPTLIELCLAATILCYYYGALYGVILLSVATTFIIFTHHATEWSSHFQTLSNDQQSQTNANIVDSLLNFASVKHFNNKKYETLKCDKYLKERENLLIKSISSMEYVRIGQNIIIGIGLILLTYTAGQQILSSVYDISDFILINGYILQFVAPLGHIGFITRDIRRGMNELASIADILRIKPETLVSSEKVYPLKRLKSIEFQNVSFGYEPERSVLKDISFYLEEGKTLGIVGATGSGKSTISNLLFKFYNTSSGRILINNQDIENFNTEQLSHLIGIVPQDITLFNTTIYENILFARPSAHKEEVEEVVKLVHLDSVLKRLPHHYDTVVGERGLKLSGGEKQRIAIARALLKRSSLYIFDEATSSLDLGTEETIMTNIAPFLKKSTTIIIAHRLSTVVNVDEILVFQHGIIEERGSHPSLLKQKGLYASLWKTHEKAQRKSHAA*