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SCNpilot_expt_500_bf_scaffold_3121

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3121_1

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comp(1..711)
DNA (711bp) protein (237aa)
Putative transcriptional regulator, GntR family n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUK3_HERA2
GntR family transcriptional regulator
Transcriptional regulator, GntR family domain {ECO:0000313|EMBL:AKA59489.1}; TaxID=1630015 species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_379.;"
SCNpilot_expt_500_bf_scaffold_3121_2
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(704..1789)
DNA (1086bp) protein (362aa)
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ABX04531.1}; EC=1.13.11.27 {ECO:0000313|EMBL:ABX04531.1};; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AUK4_HERA2
4-hydroxyphenylpyruvate dioxygenase
SCNpilot_expt_500_bf_scaffold_3121_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1937..2896
DNA (960bp) protein (320aa)
Putative taurine catabolism dioxygenase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WVG6_9NOST rbh
Uncharacterized protein {ECO:0000313|EMBL:AHH99499.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
putative taurine catabolism dioxygenase rbh
SCNpilot_expt_500_bf_scaffold_3121_4
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2933..3679)
DNA (747bp) protein (249aa)
Linear gramicidin dehydrogenase LgrE {ECO:0000313|EMBL:ERT06762.1}; EC=1.1.-.- {ECO:0000313|EMBL:ERT06762.1};; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
Linear gramicidin dehydrogenase LgrE n=1 Tax=Lyngbya aestuarii BL J RepID=U7QHJ4_9CYAN
thioesterase domain-containing protein
SCNpilot_expt_500_bf_scaffold_3121_5
Candidatus Paracaedibacter acanthamoebae, Candidatus Paracaedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3871..5655
DNA (1785bp) protein (595aa)
Uncharacterized protein {ECO:0000313|EMBL:AIK96266.1}; TaxID=91604 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Candidatus Paracaedibacter.;" source="Candidatus Paracaedibacter acanthamoebae.;"
Multidrug resistance protein Atm1 id=4064194 bin=GWA2_TM6_36_9 species=GWA2_TM6_36_9 genus=GWA2_TM6_36_9 taxon_order=GWA2_TM6_36_9 taxon_class=GWA2_TM6_36_9 phylum=TM6 tax=GWA2_TM6_36_9 organism_group=TM6 rbh
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_500_bf_scaffold_3121_6
Polysphondylium pallidum, Polysphondylium, Dictyosteliida, Eukaryota

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5645..6766
DNA (1122bp) protein (374aa)
Hydroxyacid oxidase n=1 Tax=Polysphondylium pallidum RepID=D3BRV9_POLPA rbh
Hydroxyacid oxidase {ECO:0000313|EMBL:EFA76141.1}; TaxID=13642 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Polysphondylium.;" source="Polysphondylium pallidum (Cellular slime mold).;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_3121_7
unknown

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6863..7114
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3121_8
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7174..8406)
DNA (1233bp) protein (411aa)
MFS transporter n=1 Tax=Fluoribacter dumoffii RepID=UPI0002E49DA1
Nicotinate degradation protein T {ECO:0000313|EMBL:CDZ76940.1}; Putative metabolite transport protein NicT {ECO:0000313|EMBL:CEE12678.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3121_9
unknown

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8573..8881
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 9 items

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