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SCNpilot_expt_500_bf_scaffold_12367_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..361)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 115.0
  • Bit_score: 121
  • Evalue 1.10e-24
def3; polypeptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 126.0
  • Bit_score: 92
  • Evalue 1.20e-16
Peptide deformylase 2 id=3959949 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 115.0
  • Bit_score: 121
  • Evalue 7.70e-25

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 360
ATGATACAAGAAGAAAAGAAAATGTTTCCATACGTTATTATTAATAATGAGAATTGTCAGAATCGCGATATTTTAATAAAGGCAGCAGAAGAAGTAACATTTCCTTTAACTAAAGAAGATAGAGAAATTACAGAACAATTAATTTATCAATTTAGACATGAAGAAAATTGCGCGGGTTTAGCAGCTCCACAGATTGGTTTTTCAAAACGTATTATCATATTTAGTGTTCCAGAAGAAACAAAAGAGCATAGAGTCGATGCATTTGATACAATTTCTGAAACTCTTCTTATTAACCCAACCTTTAAACCTTTAAGTGATAAAAAGAGACTTGATTGGGAAGCCTGTTTTTCAGTGAATGAT
PROTEIN sequence
Length: 120
MIQEEKKMFPYVIINNENCQNRDILIKAAEEVTFPLTKEDREITEQLIYQFRHEENCAGLAAPQIGFSKRIIIFSVPEETKEHRVDAFDTISETLLINPTFKPLSDKKRLDWEACFSVND