ggKbase home page

SCNpilot_expt_500_bf_scaffold_12367

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12367_1

Not on your lists

comp(2..361)
DNA (360bp) protein (120aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
def3; polypeptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase 2 id=3959949 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
SCNpilot_expt_500_bf_scaffold_12367_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(459..1697)
DNA (1239bp) protein (413aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL12872.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Membrane protein, putative id=4468714 bin=GWC2_Alphaproteobacteria_42_16 species=Wolbachia endosymbiont of Drosophila simulans genus=Wolbachia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
hypothetical protein
SCNpilot_expt_500_bf_scaffold_12367_3
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1753..2637
DNA (885bp) protein (295aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI28_TISMK
exoN; UTP--glucose-1-phosphate uridylyltransferase
SCNpilot_expt_500_bf_scaffold_12367_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2651..2806
DNA (156bp) protein (52aa)
nucleotide sugar dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
Predicted UDP-glucose 6-dehydrogenase n=1 Tax=uncultured Rhizobiales bacterium HF4000_32B18 RepID=E0XWC7_9RHIZ
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:AIL12874.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Displaying 4 items

View Taxonomy