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SCNpilot_expt_500_bf_scaffold_14448_6

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(4363..4746)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RL19_GRABC similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 104.0
  • Bit_score: 165
  • Evalue 5.00e-38
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 128.0
  • Bit_score: 211
  • Evalue 8.50e-52
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 104.0
  • Bit_score: 165
  • Evalue 1.60e-38

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
GTCAATTTATTAACAGCAAGTAATCCTATTCCTGAGTTCTCTTCAGGGGATACTTTAAAAGTTCTTGTAAAAGTAGTTGAAGGTGAACGTGAGCGTACACAGGCTTATGAAGGTGTCTGTATTGCCCGTAAAAATGCAGGTATTAATTCATCCTTTACAGTACGTAAATTATCCTTTGGAGAAGGTGTTGAGCGCGTTTTCCCTTTATATTCTCCGAATATTAAAATAGAAGTTGTACGTCGTGGTCAAGTTCGTCGTGCGAAGCTTTATTATCTTCGTGGTCGTACTGGTAAGAGTGCTCGTATTGCTGAGAAGAGCTACTTTAGTGATGCTCAGAAGGGAAAGTCAAAAAATAAAGTTGATTCACCGACTGAAGCTGTCTAA
PROTEIN sequence
Length: 128
VNLLTASNPIPEFSSGDTLKVLVKVVEGERERTQAYEGVCIARKNAGINSSFTVRKLSFGEGVERVFPLYSPNIKIEVVRRGQVRRAKLYYLRGRTGKSARIAEKSYFSDAQKGKSKNKVDSPTEAV*