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SCNpilot_expt_500_bf_scaffold_14448

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_14448_1
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(140..583)
DNA (444bp) protein (148aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azosp
tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225DFA4
SCNpilot_expt_500_bf_scaffold_14448_2
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1005..2261)
DNA (1257bp) protein (419aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzyme; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Dihydrolipoamide acetyltransferase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MMQ0_9PROT
SCNpilot_expt_500_bf_scaffold_14448_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2306..3301)
DNA (996bp) protein (332aa)
pdhB; pyruvate dehydrogenase E1 component subunit beta; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component, beta subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TL70_9PROT
Pyruvate dehydrogenase E1 component, beta subunit {ECO:0000313|EMBL:EDP66408.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_expt_500_bf_scaffold_14448_4
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3313..3855)
DNA (543bp) protein (181aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LUD0_9PROT
SCNpilot_expt_500_bf_scaffold_14448_5
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3890..4279)
DNA (390bp) protein (130aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
Pyruvate dehydrogenase E1 component alpha subunit (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) E1 component, alpha subunit n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KSM7_MICAA
SCNpilot_expt_500_bf_scaffold_14448_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4363..4746)
DNA (384bp) protein (128aa)
50S ribosomal protein L19 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RL19_GRABC
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
Displaying 6 items

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