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SCNpilot_expt_500_bf_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 373 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5_1
unknown

Not on your lists

3..302
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5_2
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(412..1665)
DNA (1254bp) protein (418aa)
Probable ABC-type transport system, permease component n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H1M7_FLAPJ rbh
ABC transporter permease; K09808 lipoprotein-releasing system permease protein rbh
Lipoprotein release inner membrane protein {ECO:0000313|EMBL:AIJ38802.1}; Transmembrane permease {ECO:0000313|EMBL:AIG35349.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
SCNpilot_expt_500_bf_scaffold_5_3
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1672..2955
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SS53_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU27245.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5_4
unknown

Not on your lists

3038..3262
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5_5
unknown

Not on your lists

comp(3272..3508)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5_6
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3522..4016)
DNA (495bp) protein (165aa)
Fe-S oxidoreductase n=1 Tax=Flavobacterium rivuli RepID=UPI000375A2BF rbh
Fe-S-oxidoreductase {ECO:0000313|EMBL:KGO85201.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
hypothetical protein; K06940 rbh
SCNpilot_expt_500_bf_scaffold_5_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4080..4799
DNA (720bp) protein (240aa)
Putative methyltransferase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S2Z4_9FLAO rbh
Methyltransferase {ECO:0000313|EMBL:KIA82762.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
type 11 methyltransferase rbh
SCNpilot_expt_500_bf_scaffold_5_8
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4796..5980)
DNA (1185bp) protein (395aa)
class V aminotransferase; K04127 isopenicillin-N epimerase [EC:5.1.1.17] rbh
isopenicillin N-epimerase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B39E3E rbh
Penicillin epimerase {ECO:0000313|EMBL:KGD67983.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_expt_500_bf_scaffold_5_9
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6017..6421)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6STN6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU29542.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein; K09924 hypothetical protein
SCNpilot_expt_500_bf_scaffold_5_10
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6446..6847)
DNA (402bp) protein (134aa)
Peptidase M56, BlaR1 n=1 Tax=Flavobacterium sp. F52 RepID=J1KRB1_9FLAO
Peptidase M56, BlaR1 {ECO:0000313|EMBL:EJG00683.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
outer membrane transport energization protein TonB; K03832 periplasmic protein TonB
SCNpilot_expt_500_bf_scaffold_5_11
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6853..7485)
DNA (633bp) protein (211aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Flavobacterium sp. CF136 RepID=J3BX02_9FLAO rbh
radical SAM domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_5_12
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7630..9333)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SKY0_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU27241.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5_13
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9354..10271)
DNA (918bp) protein (306aa)
Putative phosphate ABC transporter, phosphate-binding component n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMS2_9FLAO
Putative phosphate ABC transporter, phosphate-binding component {ECO:0000313|EMBL:EIA10173.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
phosphate ABC transporter; K02040 phosphate transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_5_14
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10285..10518)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B32333
Uncharacterized protein {ECO:0000313|EMBL:KFF20184.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
fpo2; hypothetical protein
SCNpilot_expt_500_bf_scaffold_5_15
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10518..11336)
DNA (819bp) protein (273aa)
biopolymer transporter TonB n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B2E804
protein TonB; K03832 periplasmic protein TonB
Protein TonB {ECO:0000313|EMBL:AEW85538.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
SCNpilot_expt_500_bf_scaffold_5_16
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11369..11941)
DNA (573bp) protein (191aa)
Biopolymer transport ExbD2 protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSK9_FLAIG
exbD2; Biopolymer transport ExbD2 protein
Biopolymer transport ExbD2 protein {ECO:0000313|EMBL:CCG52594.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_expt_500_bf_scaffold_5_17
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11964..12578)
DNA (615bp) protein (205aa)
Biopolymertransporter ExbD/TolR n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SSW7_9FLAO
Biopolymertransporter ExbD/TolR {ECO:0000313|EMBL:ESU29549.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
exbD1; Biopolymer transport ExbD1 protein
SCNpilot_expt_500_bf_scaffold_5_18
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12657..13487)
DNA (831bp) protein (277aa)
Biopolymer transport ExbB protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSK7_FLAIG rbh
exbB; Biopolymer transport ExbB protein; K03561 biopolymer transport protein ExbB rbh
Biopolymer transport ExbB protein {ECO:0000313|EMBL:CCG52592.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9).;"
SCNpilot_expt_500_bf_scaffold_5_19
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13940..15463
DNA (1524bp) protein (508aa)
Putative ATPase n=1 Tax=Flavobacterium sp. CF136 RepID=J2S337_9FLAO rbh
ATPase {ECO:0000313|EMBL:KIA82753.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K06915 rbh
SCNpilot_expt_500_bf_scaffold_5_20
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15464..15832
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XSK5_FLAIG
Membrane protein {ECO:0000313|EMBL:KGO88276.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein; K09922 hypothetical protein
SCNpilot_expt_500_bf_scaffold_5_21
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15832..16194
DNA (363bp) protein (121aa)
GCN5-related N-acetyltransferase n=1 Tax=Kordia algicida OT-1 RepID=A9DIL1_9FLAO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EDP97926.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5_22
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16236..17504
DNA (1269bp) protein (423aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
NADH dehydrogenase (Ubiquinone) n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1W1_WEEVC rbh
NADH dehydrogenase {ECO:0000313|EMBL:KJD31381.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
SCNpilot_expt_500_bf_scaffold_5_23
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17586..18935)
DNA (1350bp) protein (450aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
kynurenine 3-monooxygenase (EC:1.14.13.9); K00486 kynurenine 3-monooxygenase [EC:1.14.13.9] rbh
Kynurenine 3-monooxygenase n=1 Tax=Flavobacterium sp. CF136 RepID=J2JEM2_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_5_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19170..20102
DNA (933bp) protein (311aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA90755.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_expt_500_bf_scaffold_5_25
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20200..21696)
DNA (1497bp) protein (499aa)
Beta-lactamase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CI99_ELIME rbh
Beta-lactamase {ECO:0000313|EMBL:EOR28740.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
beta-lactamase rbh
SCNpilot_expt_500_bf_scaffold_5_26
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21785..22354)
DNA (570bp) protein (190aa)
Helix-turn-helix domain-containing protein n=2 Tax=Elizabethkingia anophelis RepID=H0KU15_9FLAO
DNA-binding protein {ECO:0000313|EMBL:KFC35531.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
helix-turN-helix domain protein
SCNpilot_expt_500_bf_scaffold_5_27
unknown

Not on your lists

comp(22630..22929)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5_28
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23006..23692)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003811321
Nuclease-related domain protein {ECO:0000313|EMBL:GAF05842.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
NERD domain-containing protein
SCNpilot_expt_500_bf_scaffold_5_29
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23906..24598)
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTB1_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05689.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_500_bf_scaffold_5_30
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24741..25301)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5Q3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK35306.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
Displaying items 1-30 of 373 in total

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