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SCNpilot_expt_500_bf_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 620 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_20_1
unknown

Not on your lists

2..205
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_20_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(337..993)
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF09898.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
Putative uncharacterized protein id=4400059 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
hypothetical protein
SCNpilot_expt_500_bf_scaffold_20_3
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1076..2167
DNA (1092bp) protein (364aa)
Endoglucanase {ECO:0000313|EMBL:AIJ38487.1}; EC=3.2.1.4 {ECO:0000313|EMBL:AIJ38487.1};; EC=3.4.11.- {ECO:0000313|EMBL:AIJ38487.1};; Peptidase M42 {ECO:0000313|EMBL:AIG32159.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
Probable M42 family peptidase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GYJ3_FLAPJ rbh
M42 family peptidase rbh
SCNpilot_expt_500_bf_scaffold_20_4
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2249..2635)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SLI4_9FLAO
Ankyrin {ECO:0000313|EMBL:KFF09890.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
ankyrin
SCNpilot_expt_500_bf_scaffold_20_5
unknown

Not on your lists

2749..2913
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_20_6
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2830..3780)
DNA (951bp) protein (317aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] rbh
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SJ61_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_20_7
unknown

Not on your lists

comp(3872..3976)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_20_8
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4021..4971)
DNA (951bp) protein (317aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C9R2_9FLAO rbh
Phosphate starvation protein PhoH {ECO:0000313|EMBL:KFF02709.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
PhoH family protein; K06217 phosphate starvation-inducible protein PhoH and related proteins rbh
SCNpilot_expt_500_bf_scaffold_20_9
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5078..5905
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034B101A rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF02708.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein; K09134 hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_20_10
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6019..6315
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SGV7_9FLAO
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:KGO86898.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_20_11
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6504..7229
DNA (726bp) protein (242aa)
Gliding motility protein GldF n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SEZ1_9FLAO rbh
ABC transporter permease {ECO:0000313|EMBL:KGD68621.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
gldF; Gliding motility transmembrane protein GldF rbh
SCNpilot_expt_500_bf_scaffold_20_12
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7229..8893
DNA (1665bp) protein (555aa)
gliding motility protein GldG n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B55154 rbh
Gliding motility protein GldG {ECO:0000313|EMBL:KGO86751.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
gliding motility ABC transporter auxiliary component-like protein rbh
SCNpilot_expt_500_bf_scaffold_20_13
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8992..10110
DNA (1119bp) protein (373aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] rbh
DNA polymerase III subunit beta n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00036C59EA rbh
SCNpilot_expt_500_bf_scaffold_20_14
unknown

Not on your lists

10121..10663
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI00035D86A4
SCNpilot_expt_500_bf_scaffold_20_15
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10925..12295)
DNA (1371bp) protein (457aa)
Succinate-semialdehyde dehydrogenase [NAD] {ECO:0000313|EMBL:EOR95071.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EOR95071.1};; EC=1.2.1.24 {ECO:0000313|EMBL:EOR95071.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ssdA; succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
succinate-semialdehyde dehdyrogenase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B3DB63 rbh
SCNpilot_expt_500_bf_scaffold_20_16
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12328..13167)
DNA (840bp) protein (280aa)
Universal stress protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFK2_9FLAO
Universal stress protein {ECO:0000313|EMBL:ESU25356.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
UspA domain-containing protein
SCNpilot_expt_500_bf_scaffold_20_17
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13310..14725
DNA (1416bp) protein (472aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] rbh
tRNA modification GTPase MnmE n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=MNME_FLAPJ rbh
SCNpilot_expt_500_bf_scaffold_20_18
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14823..15467)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI0003749C10
Uncharacterized protein {ECO:0000313|EMBL:KFF10360.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
SCNpilot_expt_500_bf_scaffold_20_19
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15889..16515
DNA (627bp) protein (209aa)
Succinate dehydrogenase cytochrome B subunit, b558 family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W637_9FLAO rbh
Succinate dehydrogenase {ECO:0000313|EMBL:KIC63510.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; K00241 succinate dehydrogenase cytochrome b556 subunit
SCNpilot_expt_500_bf_scaffold_20_20
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16527..18443
DNA (1917bp) protein (639aa)
Succinate dehydrogenase {ECO:0000313|EMBL:KIC63509.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KIC63509.1};; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W636_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_20_21
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18460..19209
DNA (750bp) protein (250aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN30_9FLAO rbh
Fumarate reductase {ECO:0000313|EMBL:KFF00542.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SCNpilot_expt_500_bf_scaffold_20_22
unknown

Not on your lists

19248..19364
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_20_23
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19307..20290)
DNA (984bp) protein (328aa)
Lipoprotein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S3U3_9FLAO rbh
Lipoprotein {ECO:0000313|EMBL:ESU21358.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
lipoprotein precursor rbh
SCNpilot_expt_500_bf_scaffold_20_24
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20552..21448)
DNA (897bp) protein (299aa)
Transcriptional regulator, MerR family n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FLN6_9FLAO
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EIA10578.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
putative MerR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_20_25
unknown

Not on your lists

21560..21793
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_20_26
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21750..22454
DNA (705bp) protein (235aa)
oxidoreductase n=1 Tax=Methylomonas sp. MK1 RepID=UPI000377D48F
Uncharacterized protein {ECO:0000313|EMBL:KGO79703.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
3-oxoacyl-ACP reductase
SCNpilot_expt_500_bf_scaffold_20_27
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22457..23875
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKY2_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM33863.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
nucleoside-diphosphate-sugar epimerase rbh
SCNpilot_expt_500_bf_scaffold_20_28
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23872..24159
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RZU0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU19644.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_20_29
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24444..25115
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQJ0_9FLAO rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KFF19928.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
TetR family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_20_30
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25119..26789
DNA (1671bp) protein (557aa)
Probable ABC-type transport system, ATPase and permease components n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWR0_FLAPJ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD69270.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
ABC transporter permease/ATPase rbh
Displaying items 1-30 of 620 in total

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