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SCNpilot_expt_500_bf_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 279 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_36_1
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..2725
DNA (2724bp) protein (908aa)
Rhs family protein n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z273_FLABF
Rhs family protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_500_bf_scaffold_36_2
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2725..3450
DNA (726bp) protein (242aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF23446.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrystaatense.;"
SCNpilot_expt_500_bf_scaffold_36_3
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3466..3921
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO78846.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
SCNpilot_expt_500_bf_scaffold_36_4
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4279..4464
DNA (186bp) protein (62aa)
Phage integrase family protein id=2763864 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
phage integrase
Tax=GWF1_Flavobacteria_32_7_curated
SCNpilot_expt_500_bf_scaffold_36_5
unknown

Not on your lists

4612..4761
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_36_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5307..6137)
DNA (831bp) protein (277aa)
Prestalk A differentiation protein A n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG44_9BACT rbh
Prestalk A differentiation protein A {ECO:0000313|EMBL:CCH52869.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
NmrA family protein rbh
SCNpilot_expt_500_bf_scaffold_36_7
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

6247..7329
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG20_9BACT id=1244724 bin=RBG9 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG9 organism_group=Chloroflexi rbh
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
SCNpilot_expt_500_bf_scaffold_36_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7334..8149
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0F0_FLAPJ
Contig13, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78471.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein; K07017
SCNpilot_expt_500_bf_scaffold_36_9
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8168..8788
DNA (621bp) protein (207aa)
Sporulation regulation protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S1Y2_9FLAO
putative transcriptional regulator; K07734 transcriptional regulator
Probable transcriptional regulator {ECO:0000313|EMBL:EAR01690.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
SCNpilot_expt_500_bf_scaffold_36_10
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8855..9706
DNA (852bp) protein (284aa)
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] rbh
O-6-methylguanine DNA methyltransferase n=1 Tax=Flavobacterium sp. CF136 RepID=J3C860_9FLAO rbh
Strain DSM 12611 Contig05, whole genome shotgun sequence {ECO:0000313|EMBL:KIO53663.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
SCNpilot_expt_500_bf_scaffold_36_11
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9710..10423
DNA (714bp) protein (238aa)
Prolyl 4-hydroxylase subunit alpha n=1 Tax=Flavobacterium sp. F52 RepID=J0RNK2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EZH74191.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein; K09990 hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_36_12
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10426..10683
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K033_9FLAO
Metal-binding protein {ECO:0000313|EMBL:KGO10598.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_36_13
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10670..11272
DNA (603bp) protein (201aa)
DNA-N1-methyladenine dioxygenase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJL3_FLAJ1
Contig30, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77692.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
2OG-Fe(II) oxygenase
SCNpilot_expt_500_bf_scaffold_36_14
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11290..12003)
DNA (714bp) protein (238aa)
DNA recombination and repair protein RecO n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SR58_9FLAO rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) rbh
SCNpilot_expt_500_bf_scaffold_36_15
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12019..14313)
DNA (2295bp) protein (765aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S486_9FLAO rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIA87097.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
periplasmic ligand-binding sensor protein rbh
SCNpilot_expt_500_bf_scaffold_36_16
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14446..15891)
DNA (1446bp) protein (482aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] rbh
Glutamate dehydrogenase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWB2_FLAPJ rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_expt_500_bf_scaffold_36_17
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16056..16835
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMX9_9FLAO rbh
Glutamate dehydrogenase {ECO:0000313|EMBL:KGD67094.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_36_18
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16886..18031)
DNA (1146bp) protein (382aa)
Cys/Met metabolism PLP-dependent enzyme; K01760 cystathionine beta-lyase [EC:4.4.1.8] rbh
Cys/Met metabolism PLP-dependent enzyme n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWJ4_FLAPJ rbh
Cystathionine gamma-synthase {ECO:0000313|EMBL:KFF20370.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
SCNpilot_expt_500_bf_scaffold_36_19
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18126..18896
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C4V9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA98218.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_36_20
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18898..19353)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWJ3_FLAPJ
Uncharacterized protein {ECO:0000313|EMBL:KGD67088.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_36_21
unknown

Not on your lists

comp(19402..19770)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_36_22
unknown

Not on your lists

comp(19788..20201)
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_36_23
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20250..20603
DNA (354bp) protein (118aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Glutaredoxin family protein, arsenate reductase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXZ0_9FLAO
Glutaredoxin family protein, arsenate reductase {ECO:0000313|EMBL:ESU19356.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
SCNpilot_expt_500_bf_scaffold_36_24
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20605..21501
DNA (897bp) protein (299aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FMX4_9FLAO rbh
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:EIA10108.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
drug/metabolite-transporting permease rbh
SCNpilot_expt_500_bf_scaffold_36_25
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21592..22449
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003779CC6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO81130.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_36_26
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22470..23045
DNA (576bp) protein (192aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
guanylate kinase n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B411D9 rbh
SCNpilot_expt_500_bf_scaffold_36_27
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23125..23706
DNA (582bp) protein (194aa)
nadD; Nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] rbh
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CCG53832.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavoba
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XUQ4_FLAIG rbh
SCNpilot_expt_500_bf_scaffold_36_28
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23830..24393
DNA (564bp) protein (188aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RXY5_9FLAO rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:ESU19351.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
putative Crp/Fnr family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_36_29
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24489..25271
DNA (783bp) protein (261aa)
Putative intracellular protease/amidase n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S4N7_9FLAO rbh
Putative intracellular protease/amidase {ECO:0000313|EMBL:ESU19350.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
putative intracellular protease/amidase rbh
SCNpilot_expt_500_bf_scaffold_36_30
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25338..26498
DNA (1161bp) protein (387aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6S477_9FLAO rbh
Aldehyde reductase {ECO:0000313|EMBL:KGO81126.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
iron-containing alcohol dehydrogenase rbh
Displaying items 1-30 of 279 in total

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