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SCNpilot_expt_500_bf_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 271 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_68_1
unknown

Not on your lists

comp(840..1082)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_2
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1301..1699
DNA (399bp) protein (133aa)
response regulator n=1 Tax=Cytophaga aurantiaca RepID=UPI00035F3100
Transcriptional regulator {ECO:0000313|EMBL:KGD68654.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
response regulator receiver protein
SCNpilot_expt_500_bf_scaffold_68_3
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1943..2752)
DNA (810bp) protein (270aa)
Probable oxidoreductase (Probable short-chain dehydrogenase) n=1 Tax=Pedobacter sp. BAL39 RepID=A6E9D9_9SPHI rbh
Probable oxidoreductase (Probable short-chain dehydrogenase) {ECO:0000313|EMBL:EDM37770.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
short-chain dehydrogenase/reductase SDR; K07124 rbh
SCNpilot_expt_500_bf_scaffold_68_4
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2798..3511)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FGN2_FLAJ1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ05644.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_68_5
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3489..6218)
DNA (2730bp) protein (910aa)
ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
ATP-dependent DNA ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4K9_FLAB3 rbh
DNA ligase {ECO:0000313|EMBL:KFE99172.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
SCNpilot_expt_500_bf_scaffold_68_6
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6235..6423)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344DFF7
Uncharacterized protein {ECO:0000313|EMBL:KFF73833.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_7
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6467..7075)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00037721F4
Uncharacterized protein {ECO:0000313|EMBL:KFF02678.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_8
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7087..9249)
DNA (2163bp) protein (721aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
catalase (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6] rbh
hydroperoxidase II n=1 Tax=Flavobacterium rivuli RepID=UPI0003688697 rbh
SCNpilot_expt_500_bf_scaffold_68_9
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9616..11817
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J0RJH1_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJF99051.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_68_10
unknown

Not on your lists

comp(12218..12718)
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_11
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12965..13510
DNA (546bp) protein (182aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B41E04
AraC family transcriptional regulator {ECO:0000313|EMBL:KGD68655.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_68_12
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13533..14252
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KPI6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KDN55469.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
hypothetical protein; K09166 hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_13
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14380..14949
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X132_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU08145.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_expt_500_bf_scaffold_68_14
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15024..15632
DNA (609bp) protein (203aa)
SET domain-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2JKW1_9FLAO
SET domain-containing protein {ECO:0000313|EMBL:EJL61638.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
SET domain-containing protein
SCNpilot_expt_500_bf_scaffold_68_15
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15707..16072
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8R2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF06456.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_16
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16204..17199
DNA (996bp) protein (332aa)
PAS domain S-box n=1 Tax=Flavobacterium sp. CF136 RepID=J3BZR9_9FLAO
PAS domain S-box {ECO:0000313|EMBL:EJL61169.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
putative PAS/PAC sensor protein
SCNpilot_expt_500_bf_scaffold_68_17
unknown

Not on your lists

comp(17071..17352)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_18
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18033..18779)
DNA (747bp) protein (249aa)
NmrA family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI000374D1D7 rbh
NmrA family transcriptional regulator {ECO:0000313|EMBL:KDN54589.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
NmrA family protein rbh
SCNpilot_expt_500_bf_scaffold_68_19
Flavobacterium sp. EM1321, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18918..19817)
DNA (900bp) protein (300aa)
Transcriptional regulator, AraC family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGA7_FLUTR
Uncharacterized protein {ECO:0000313|EMBL:KDN54588.1}; TaxID=1492738 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1321.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_68_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

20539..21729
DNA (1191bp) protein (397aa)
phage integrase n=1 Tax=Pedobacter agri RepID=UPI00029B3587 rbh
xerD; integrase/recombinase xerD-like protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_500_bf_scaffold_68_21
unknown

Not on your lists

comp(21682..21798)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_22
unknown

Not on your lists

22047..22781
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_23
unidentified eubacterium SCB49, Bacteroidetes, Bacteria

Not on your lists

22912..24723
DNA (1812bp) protein (604aa)
Putative uncharacterized protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EMS5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM44941.1}; TaxID=50743 species="Bacteria; Bacteroidetes; environmental samples.;" source="unidentified eubacterium SCB49.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_68_24
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24843..25634
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDX4_FLAJ1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ06589.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_68_25
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25636..28782
DNA (3147bp) protein (1049aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FDX5_FLAJ1 rbh
DEAD/DEAH box helicase rbh
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABQ06590.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_68_26
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28869..30551)
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000361564C
Tax=GWF2_Bacteroidetes_33_38_curated
SCNpilot_expt_500_bf_scaffold_68_27
unknown

Not on your lists

comp(30563..31336)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_68_28
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31736..32509
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Vibrio cyclitrophicus RepID=UPI00031941BF
hypothetical protein
Tax=DS1215_Halomonas_54_146
SCNpilot_expt_500_bf_scaffold_68_29
Pseudomonas sp. GM25, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32490..34775
DNA (2286bp) protein (762aa)
helicase n=1 Tax=Pseudomonas sp. S9 RepID=UPI0002557146 rbh
Superfamily II helicase {ECO:0000313|EMBL:EJM28710.1}; TaxID=1144327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM25.;"
helicase domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_68_30
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35548..36192)
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF09049.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
Displaying items 1-30 of 271 in total

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