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SCNpilot_expt_500_bf_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_134_1
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..358
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF09078.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
SCNpilot_expt_500_bf_scaffold_134_2
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

660..2354
DNA (1695bp) protein (565aa)
ABC transporter ATP-binding protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVD4_9FLAO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EIA07557.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
putative translation initiation protein rbh
SCNpilot_expt_500_bf_scaffold_134_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2424..4631
DNA (2208bp) protein (736aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FB53_FLAJ1 rbh
Histidine kinase {ECO:0000313|EMBL:KIA85860.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
integral membrane sensor hybrid histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_134_4
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4633..5463)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XL41_LEEBM rbh
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:KGO94570.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
endonuclease/exonuclease/phosphatase; K06896 rbh
SCNpilot_expt_500_bf_scaffold_134_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5494..6768)
DNA (1275bp) protein (425aa)
putative ATP-dependent RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] rbh
DEAD/DEAH box helicase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034874CD rbh
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFC60985.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
SCNpilot_expt_500_bf_scaffold_134_6
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6930..10019)
DNA (3090bp) protein (1030aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBW1_FLAJ1 rbh
Cation transporter {ECO:0000313|EMBL:KGO80204.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
SCNpilot_expt_500_bf_scaffold_134_7
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10027..11103)
DNA (1077bp) protein (359aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBX5_FLAJ1 rbh
RND transporter {ECO:0000313|EMBL:KFF15780.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
SCNpilot_expt_500_bf_scaffold_134_8
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11131..12417)
DNA (1287bp) protein (429aa)
Outer membrane efflux protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBX4_FLAJ1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA94464.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
outer membrane efflux protein rbh
SCNpilot_expt_500_bf_scaffold_134_9
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12513..13865)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBX3_FLAJ1 rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_134_10
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13869..14543)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBX2_FLAJ1 rbh
two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABQ07299.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_134_11
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14544..15584)
DNA (1041bp) protein (347aa)
arginase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003456F29 rbh
Arginase {ECO:0000313|EMBL:KFC60984.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
arginase/agmatinase/formiminoglutamase rbh
SCNpilot_expt_500_bf_scaffold_134_12
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15693..16574
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B70E1F rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD66760.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_134_13
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16674..17426)
DNA (753bp) protein (251aa)
UniRef90_I2ERD0 Beta-lactamase n=1 Tax=Emticicia oligotrophica DSM 17448 RepID=I2ERD0_EMTOG id=720695 bin=RAAC39 species=Emticicia oligotrophica genus=Emticicia taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RAAC39 organism_group=Ignavibacteria rbh
Beta-lactamase {ECO:0000313|EMBL:BAP33411.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
beta-lactamase rbh
SCNpilot_expt_500_bf_scaffold_134_14
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17453..18754)
DNA (1302bp) protein (434aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7] rbh
Imidazolonepropionase id=2737969 bin=GWF1_Flavobacteria_32_7 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes rbh
SCNpilot_expt_500_bf_scaffold_134_15
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18827..19909
DNA (1083bp) protein (361aa)
CorA protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDM0_9FLAO rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
corA; magnesium/cobalt transporter CorA; K03284 magnesium transporter rbh
SCNpilot_expt_500_bf_scaffold_134_16
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19928..20632
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5A3A4 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO89906.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_134_17
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20714..21274
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:KIX20167.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
SCNpilot_expt_500_bf_scaffold_134_18
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(21300..22592)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRJ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIF31655.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_134_19
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22801..24198)
DNA (1398bp) protein (466aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
fumC; fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2] rbh
Fumarate hydratase class II n=6 Tax=Flavobacterium psychrophilum RepID=A6H000_FLAPJ rbh
SCNpilot_expt_500_bf_scaffold_134_20
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24220..24726)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C596_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL64484.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_134_21
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24997..25155
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FU58_9FLAO
Serine hydroxymethyltransferase {ECO:0000313|EMBL:KFF16930.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_134_22
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25243..27723)
DNA (2481bp) protein (827aa)
TonB-denpendent receptor n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B5FFC0 rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:ESU25596.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
TonB-dependent outer membrane receptor precursor rbh
SCNpilot_expt_500_bf_scaffold_134_23
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27822..28163)
DNA (342bp) protein (114aa)
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PK30_MURRD
Arsenate reductase {ECO:0000313|EMBL:AEM72015.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
SCNpilot_expt_500_bf_scaffold_134_24
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28281..29270
DNA (990bp) protein (330aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FU61_9FLAO rbh
Abortive phage infection protein {ECO:0000313|EMBL:KIA93942.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
abortive infection protein; K07052 rbh
SCNpilot_expt_500_bf_scaffold_134_25
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29212..30294
DNA (1083bp) protein (361aa)
menE; o-succinylbenzoate--CoA ligase (EC:6.2.1.26); K01911 O-succinylbenzoic acid--CoA ligase [EC:6.2.1.26] rbh
O-succinylbenzoic acid--CoA ligase {ECO:0000313|EMBL:KGD67660.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
O-succinylbenzoate--CoA ligase id=4974795 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds rbh
SCNpilot_expt_500_bf_scaffold_134_26
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30320..31936)
DNA (1617bp) protein (539aa)
M1 family metalloprotease precursor (EC:3.4.11.-) rbh
Metalloprotease n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2W8_9FLAO rbh
Metalloprotease {ECO:0000313|EMBL:ESU18715.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
SCNpilot_expt_500_bf_scaffold_134_27
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31956..32621)
DNA (666bp) protein (222aa)
Methyltransferase type 11 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FJS6_FLAJ1
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ04544.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_134_28
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32627..34255)
DNA (1629bp) protein (543aa)
propionyl-CoA carboxylase (EC:6.4.1.3) rbh
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABQ05573.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABQ05573.1};; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
methylcrotonoyl-CoA carboxylase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034DE4B9 rbh
SCNpilot_expt_500_bf_scaffold_134_29
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34451..35095
DNA (645bp) protein (215aa)
Phosphate transport regulator n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6RW60_9FLAO rbh
Phosphate transport regulator {ECO:0000313|EMBL:KGO89917.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein; K07220 hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_134_30
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

35119..36402
DNA (1284bp) protein (428aa)
Phosphate transporter n=1 Tax=Flavobacterium sp. F52 RepID=J0RVG1_9FLAO rbh
Phosphate transporter {ECO:0000313|EMBL:KIA85803.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
phosphate transporter; K03306 inorganic phosphate transporter, PiT family rbh
Displaying items 1-30 of 84 in total

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