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SCNpilot_expt_500_bf_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_232_1
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3751..4422
DNA (672bp) protein (224aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] rbh
GTP cyclohydrolase 1 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=GCH1_FLAJ1 rbh
SCNpilot_expt_500_bf_scaffold_232_2
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4480..5958
DNA (1479bp) protein (493aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hibernum.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] rbh
Cysteine--tRNA ligase n=1 Tax=Flavobacterium sp. CF136 RepID=J2S2S9_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_232_3
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5965..6261
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI0003752060
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein; K08998 hypothetical protein
SCNpilot_expt_500_bf_scaffold_232_4
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6328..7257
DNA (930bp) protein (310aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SE72_9FLAO rbh
prolipoprotein diacylglyceryl transferase rbh
SCNpilot_expt_500_bf_scaffold_232_5
unknown

Not on your lists

7498..7716
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_232_6
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7621..10632)
DNA (3012bp) protein (1004aa)
Protein-export membrane protein SecD / Protein-export membrane protein SecF n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRL1_9FLAO rbh
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KFF19094.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
secDF; preprotein translocase SecD and SecF subunits; K12257 SecD/SecF fusion protein rbh
SCNpilot_expt_500_bf_scaffold_232_7
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10854..11789)
DNA (936bp) protein (312aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
mdh; malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] rbh
Malate dehydrogenase id=4400839 bin=GWA2_Flavobacterium_35_26 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds rbh
SCNpilot_expt_500_bf_scaffold_232_8
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11903..13741)
DNA (1839bp) protein (613aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
DNA gyrase subunit B n=2 Tax=Flavobacterium RepID=J1KYA9_9FLAO rbh
SCNpilot_expt_500_bf_scaffold_232_9
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13962..15578)
DNA (1617bp) protein (539aa)
asnB; asparagine synthetase B (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GX09_FLAPJ rbh
Asparagine synthetase B {ECO:0000313|EMBL:KGD67010.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_expt_500_bf_scaffold_232_10
unknown

Not on your lists

15701..15868
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_232_11
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15785..16234)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FRK5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC59001.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_232_12
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16408..18165)
DNA (1758bp) protein (586aa)
Putative integral outer membrane protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S1E9_9FLAO rbh
TonB-dependent receptor {ECO:0000313|EMBL:KGD67012.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
TonB-dependent receptor rbh
SCNpilot_expt_500_bf_scaffold_232_13
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18198..21215)
DNA (3018bp) protein (1006aa)
TPR-domain containing protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SJG2_9FLAO rbh
Tetratricopeptide repeat protein {ECO:0000313|EMBL:KGO82057.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_232_14
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21449..22132
DNA (684bp) protein (228aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4E910 rbh
ABC transporter-like protein; K09812 cell division transport system ATP-binding protein rbh
Tax=GWF1_Flavobacteria_32_7_curated
SCNpilot_expt_500_bf_scaffold_232_15
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22129..23253)
DNA (1125bp) protein (375aa)
Putative mannosyltransferase n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0NXY9_WEEVC rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO97450.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
mannosyltransferase rbh
SCNpilot_expt_500_bf_scaffold_232_16
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23335..24279
DNA (945bp) protein (315aa)
Glycosyl transferase family 2 n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AZH2_KROS4
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEE20075.1}; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)).;"
SCNpilot_expt_500_bf_scaffold_232_17
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24270..24668)
DNA (399bp) protein (133aa)
WxcM-like domain-containing protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SN53_9FLAO
WxcM-like domain-containing protein {ECO:0000313|EMBL:ESU25840.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_232_18
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24672..25763)
DNA (1092bp) protein (364aa)
Glycosyltransferase n=1 Tax=Flavobacterium sp. CF136 RepID=J2SLU2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD67018.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
Glycosyl transferase, group 1 family protein
SCNpilot_expt_500_bf_scaffold_232_19
Flavobacterium reichenbachii, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25809..26960
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036071CF rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KFF06170.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;"
wbsE; glycosyl transferase WbsE rbh
SCNpilot_expt_500_bf_scaffold_232_20
Vibrio sp. S234-5, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26964..28628
DNA (1665bp) protein (555aa)
membrane protein n=1 Tax=Desulfovibrio sp. Dsv1 RepID=UPI0003A0A594
Membrane protein {ECO:0000313|EMBL:KJR36131.1}; TaxID=1616781 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. S234-5.;"
SCNpilot_expt_500_bf_scaffold_232_21
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28634..29368)
DNA (735bp) protein (245aa)
Dolichyl phosphate glucosyltransferase n=1 Tax=Formosa sp. AK20 RepID=M7N8S5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO82055.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
glycosyl transferase family protein
SCNpilot_expt_500_bf_scaffold_232_22
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29386..30678)
DNA (1293bp) protein (431aa)
Lipopolysaccharide biosynthesis protein WzxE n=1 Tax=Flavobacterium sp. F52 RepID=J1ALL8_9FLAO rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KIC00164.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
wzxE; lipopolysaccharide biosynthesis protein WzxE; K03328 polysaccharide transporter, PST family rbh
SCNpilot_expt_500_bf_scaffold_232_23
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30679..31776)
DNA (1098bp) protein (366aa)
Probable aminotransferase involved in lipopolysaccharide biosynthesis n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0R2_FLAPJ rbh
Aminotransferase {ECO:0000313|EMBL:KFF19078.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
aminotransferase rbh
SCNpilot_expt_500_bf_scaffold_232_24
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31773..32750)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B794C0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD67027.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_232_25
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32884..34695
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XV41_FLAIG rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD67028.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_232_26
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34697..35299)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FHQ9_FLAJ1 rbh
Membrane protein {ECO:0000313|EMBL:KIA85100.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_232_27
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35456..36199)
DNA (744bp) protein (248aa)
Putative membrane protein/domain-containing protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SDE0_9FLAO rbh
Transporter {ECO:0000313|EMBL:KGO97438.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
RDD domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_232_28
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36220..37188
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SE96_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU24587.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_232_29
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

37185..38138
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C8L2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO90092.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_232_30
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38080..38892
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2SLV2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL66472.1}; Flags: Precursor;; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
hypothetical protein
Displaying items 1-30 of 55 in total

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